RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TTLL1O95922 423 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PPP2R5EQ16537 467 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 ADCK1Q86TW2 530 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 MREGQ8N565 214 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 DEPTORQ8TB45 409 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PAGR1Q9BTK6 254 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 FLT1P17948 1338 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 KRT1P04264 644 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PEX2P28328 305 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 IREB2P48200 963 aaKnown RBP11.66□□□□□ -0.54
PBX1-212ENST00000540236 BCAMP50895 628 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 AQP5P55064 265 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 COASYQ13057 564 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 MAPK7Q13164 816 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 UBE2SQ16763 222 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 GPR107Q5VW38 600 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 SLC2A7Q6PXP3 512 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 COX4I2Q96KJ9 171 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 DACH2Q96NX9 599 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
PBX1-212ENST00000540236 TRPC7Q9HCX4 862 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 EMILIN3Q9NT22 766 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 TLK1Q9UKI8 766 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PCDHGA3Q9Y5H0 932 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 IQGAP1P46940 1657 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 ZBTB39O15060 712 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 RASA1P20936 1047 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 HMOX2P30519 316 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 EFHC1Q5JVL4 640 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 TTI2Q6NXR4 508 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 KBTBD2Q8IY47 623 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PPM1NQ8N819 430 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 TBCKQ8TEA7 893 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 SERPINB12Q96P63 405 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 WRNIP1Q96S55 665 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 RNF38Q9H0F5 515 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 ANGPTL3Q9Y5C1 460 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 A0A1W2PQJ5 194 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 HNRNPCL2B2RXH8 293 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 TBX10O75333 385 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 KRT7P08729 469 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 RSBN1Q5VWQ0 802 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 ZCCHC23Q6ZST2 131 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 C20orf96Q9NUD7 363 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 RSL24D1Q9UHA3 163 aaKnown RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 CHKBQ9Y259 395 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DGKBQ9Y6T7 804 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 AKAP10O43572 662 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 TPST1O60507 370 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 COMTP21964 271 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ADD2P35612 726 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 MAGEA4P43358 317 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 OGFOD2Q6N063 350 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 TTC33Q6PID6 262 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 LAYNQ6UX15 382 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 NRG4Q8WWG1 115 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ZNF75CPQ92670 426 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 LRMDAQ9H2I8 198 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 C5orf60A6NFR6 353 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ANKRD63C9JTQ0 380 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 MCAMP43121 646 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ARL4CP56559 192 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 UBE3AQ05086 875 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 NADK2Q4G0N4 442 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 NT5DC1Q5TFE4 455 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DEFB107AQ8IZN7 70 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DEPDC4Q8N2C3 294 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 CALML6Q8TD86 181 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DGCR14Q96DF8 476 aaKnown RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 CLIP3Q96DZ5 547 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 OXNAD1Q96HP4 312 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 RNF103-CHMP3A0A140T963 221 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 MYCLP1P12525 358 aaPredicted RBP11.65□□□□□ -0.54
PBX1-212ENST00000540236 SERPINB1P30740 379 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 LRRC8EQ6NSJ5 796 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 BNIPLQ7Z465 357 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 USP33Q8TEY7 942 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 CSRNP1Q96S65 589 aa11.65□□□□□ -0.54
PBX1-212ENST00000540236 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.55
PBX1-212ENST00000540236 GSC2O15499 205 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 CYP1A1P04798 512 aaPredicted RBP11.65□□□□□ -0.55
PBX1-212ENST00000540236 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 RCVRNP35243 200 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 ARSEP51690 589 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 INHBCP55103 352 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 FKBP3Q00688 224 aaKnown RBP11.65□□□□□ -0.55
PBX1-212ENST00000540236 ZNF618Q5T7W0 954 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.55
PBX1-212ENST00000540236 DGKHQ86XP1 1220 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms