RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GADD45BO75293 160 aaPredicted RBP19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 IL18RAPO95256 599 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 HOXB8P17481 243 aaPredicted RBP19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 PSMD2Q13200 908 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 KNOP1Q1ED39 458 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 RARS2Q5T160 578 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 SCARA3Q6AZY7 606 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 LILRA6Q6PI73 481 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 CBWD2Q8IUF1 395 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 GPD1LQ8N335 351 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 BEST2Q8NFU1 509 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 SUSD3Q96L08 255 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 RBAKQ9NYW8 714 aaPredicted RBP19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 HSPBP1Q9NZL4 362 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 C2CD2Q9Y426 696 aa19.84■□□□□ 0.77
SNRPA1-203ENST00000540017 ANO9A1A5B4 782 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 TGM5O43548 720 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 XPOTO43592 962 aaKnown RBP19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 RHOBTB3O94955 611 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 GLUD1P00367 558 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 WEE2P0C1S8 567 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 MCM4P33991 863 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 AARSP49588 968 aaKnown RBP eCLIP19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 FAM160A1Q05DH4 1040 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 C9orf57Q5W0N0 161 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 PDE11AQ9HCR9 933 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 MAN1C1Q9NR34 630 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 DZANK1Q9NVP4 752 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 MTRRQ9UBK8 725 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 FAM50BQ9Y247 325 aa19.83■□□□□ 0.77
SNRPA1-203ENST00000540017 TTC28Q96AY4 2481 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 TULP1O00294 542 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 PIRO00625 290 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 SPTLC1O15269 473 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 CREMQ03060 361 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 ZP2Q05996 745 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 PNOCQ13519 176 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 VARS2Q5ST30 1063 aaKnown RBP19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 TMC5Q6UXY8 1006 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 ADAM7Q9H2U9 754 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 DPP3Q9NY33 737 aa19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-203ENST00000540017 M0QZQ0 153 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 SYN3O14994 580 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 KIAA0391O15091 583 aaKnown RBP19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 TBC1D4O60343 1298 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 OR1D2P34982 312 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 CYP2J2P51589 502 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 LILRA4P59901 499 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 MRPL58Q14197 206 aaKnown RBP19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 PDXDC1Q6P996 788 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 ANKS3Q6ZW76 656 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 ADHFE1Q8IWW8 467 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 RDH13Q8NBN7 331 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 KCTD10Q9H3F6 313 aa19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 TIMM13Q9Y5L4 95 aaPredicted RBP19.81■□□□□ 0.76
SNRPA1-203ENST00000540017 PTPRJQ12913 1337 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 ZNF233A6NK53 670 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 RFPL2O75678 378 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 SNRPFP62306 86 aaKnown RBP19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 TFAMQ00059 246 aaKnown RBP19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 ITIH3Q06033 890 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 KCNB1Q14721 858 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 CBX2Q14781 532 aaPredicted RBP19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 LMBRD2Q68DH5 695 aaPredicted RBP19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 C12orf56Q8IXR9 622 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 CXorf38Q8TB03 319 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 ERCC4Q92889 916 aaPredicted RBP19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 SFXN1Q9H9B4 322 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 PRKAG3Q9UGI9 489 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 PCDHB8Q9UN66 801 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 BACE2Q9Y5Z0 518 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 CDY1Q9Y6F8 540 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 SCN1AP35498 2009 aa19.8■□□□□ 0.76
SNRPA1-203ENST00000540017 C19orf67A6NJJ6 358 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 TNFRSF10AO00220 468 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 C1RP00736 705 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 RAB33AQ14088 237 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 SNRNP35Q16560 246 aaKnown RBP19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 NT5DC4Q86YG4 428 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 C1orf127Q8N9H9 656 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 XXYLT1Q8NBI6 393 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 KREMEN2Q8NCW0 462 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 OR5B17Q8NGF7 314 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 KHSRPQ92945 711 aaKnown RBP eCLIP19.79■□□□□ 0.767e-7■■■□□ 16
SNRPA1-203ENST00000540017 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 FBXW11Q9UKB1 542 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 MAPK8IP1Q9UQF2 711 aa19.79■□□□□ 0.76
SNRPA1-203ENST00000540017 MTCL1Q9Y4B5 1905 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 SLC8B1Q6J4K2 584 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 CES5AQ6NT32 575 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 DSTYKQ6XUX3 929 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 GPR149Q86SP6 731 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 GJD3Q8N144 294 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 HDAC7Q8WUI4 952 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 CCDC47Q96A33 483 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 ZNF707Q96C28 371 aaPredicted RBP19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 BORCS6Q96GS4 357 aa19.78■□□□□ 0.76
SNRPA1-203ENST00000540017 SENP8Q96LD8 212 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms