RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 EFCAB13Q8IY85 973 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 UBR7Q8N806 425 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 ACTRT1Q8TDG2 376 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 HES6Q96HZ4 224 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
LTBR-207ENST00000539925 MTG1Q9BT17 334 aaPredicted RBP18.35■□□□□ 0.53
LTBR-207ENST00000539925 UPF3AQ9H1J1 476 aaKnown RBP18.35■□□□□ 0.53
LTBR-207ENST00000539925 CYP3A43Q9HB55 503 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 ARFGAP3Q9NP61 516 aa18.35■□□□□ 0.53
LTBR-207ENST00000539925 NCK2O43639 380 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 CST3P01034 146 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 CYP1A1P04798 512 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 UNGP13051 313 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 CYBAP13498 195 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 NSFP46459 744 aaKnown RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 CENPCQ03188 943 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 TMEM132DQ14C87 1099 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 KIZQ2M2Z5 673 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ZNF667Q5HYK9 610 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 LIN9Q5TKA1 542 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ARID3AQ99856 593 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ZNF518BQ9C0D4 1074 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 FAM49AQ9H0Q0 323 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 ANKZF1Q9H8Y5 726 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 KCNK3O14649 394 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 KIF3CO14782 793 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ZSCAN20P17040 1043 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 EIF4BP23588 611 aaKnown RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 CLCN6P51797 869 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 YARSP54577 528 aaKnown RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 OSTNP61366 133 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 MAP9Q49MG5 647 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 UBL4BQ8N7F7 174 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 CEP120Q8N960 986 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ZNF653Q96CK0 615 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 ARHGEF26Q96DR7 871 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 CPB2Q96IY4 423 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 XYLT2Q9H1B5 865 aa18.34■□□□□ 0.53
LTBR-207ENST00000539925 TTC7AQ9ULT0 858 aaPredicted RBP18.34■□□□□ 0.53
LTBR-207ENST00000539925 PDE2AO00408 941 aaPredicted RBP18.33■□□□□ 0.52
LTBR-207ENST00000539925 CRYBB1P53674 252 aaPredicted RBP18.33■□□□□ 0.52
LTBR-207ENST00000539925 PPP2R5EQ16537 467 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 RSPH3Q86UC2 560 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 NOA1Q8NC60 698 aaKnown RBP18.33■□□□□ 0.52
LTBR-207ENST00000539925 CFHR5Q9BXR6 569 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 CARD9Q9H257 536 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 OSGEPQ9NPF4 335 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 CEP83Q9Y592 693 aa18.33■□□□□ 0.52
LTBR-207ENST00000539925 PGRMC1O00264 195 aaKnown RBP18.32■□□□□ 0.52
LTBR-207ENST00000539925 SEPT4O43236 478 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 MED7O43513 233 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 TOMM70O94826 608 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 RARBP10826 455 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 HOXD10P28358 340 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 CXCR5P32302 372 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 TNNC1P63316 161 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 RBP5P82980 135 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 SLC10A6Q3KNW5 377 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 JADE1Q6IE81 842 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 PHF13Q86YI8 300 aaPredicted RBP18.32■□□□□ 0.52
LTBR-207ENST00000539925 ZNF564Q8TBZ8 553 aaPredicted RBP18.32■□□□□ 0.52
LTBR-207ENST00000539925 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 BCO2Q9BYV7 579 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 WNT8AQ9H1J5 351 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 MRPL47Q9HD33 250 aaKnown RBP18.32■□□□□ 0.52
LTBR-207ENST00000539925 CISHQ9NSE2 258 aa18.32■□□□□ 0.52
LTBR-207ENST00000539925 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
LTBR-207ENST00000539925 M0QZ92 97 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 THAP12O43422 761 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 PAEPP09466 180 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 C6orf222P0C671 652 aaPredicted RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 RHOXF2BP0C7M4 288 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 FLT3LGP49771 235 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 CDR2LQ86X02 465 aaPredicted RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 MCOLN2Q8IZK6 566 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 RASGEF1CQ8N431 466 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 C1orf127Q8N9H9 656 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 RHOXF2Q9BQY4 288 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.31■□□□□ 0.523e-8■■■■■ 29.7
LTBR-207ENST00000539925 CNOT8Q9UFF9 292 aaKnown RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 SCINQ9Y6U3 715 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 CCDC188H7C350 402 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 TFRCP02786 760 aaKnown RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 NFICP08651 508 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 KRT19P08727 400 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 HOXA11P31270 313 aaPredicted RBP18.31■□□□□ 0.52
LTBR-207ENST00000539925 SLC1A1P43005 524 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 ASPAP45381 313 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 GNASQ5JWF2 1037 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 USP38Q8NB14 1042 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 FAM84AQ96KN4 292 aa18.31■□□□□ 0.52
LTBR-207ENST00000539925 PSMB7Q99436 277 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms