RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 RBP5P82980 135 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 APBA1Q02410 837 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 IQCEQ6IPM2 695 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 MFSD5Q6N075 450 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 RRAGAQ7L523 313 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM199Q8N511 208 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 HELQQ8TDG4 1101 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 JAKMIP2Q96AA8 810 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 TRIM43Q96BQ3 446 aaPredicted RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 FAM84AQ96KN4 292 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 STK33Q9BYT3 514 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 NLRC4Q9NPP4 1024 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 ZNHIT6Q9NWK9 470 aaKnown RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM161AQ9NX61 479 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 DPP3Q9NY33 737 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 KLK14Q9P0G3 267 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 ANK1P16157 1881 aa11.46□□□□□ -0.58
LEMD3-202ENST00000539442 CITO14578 2027 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ARL5CA6NH57 179 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 F8VZ95 297 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ENPP3O14638 875 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 HOXA2O43364 376 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 EFCAB14O75071 495 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ITGB3P05106 788 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 THP07101 528 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 KRT19P08727 400 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 LRPAP1P30533 357 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 PNPLA4P41247 253 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 STAT1P42224 750 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 JAM2P57087 298 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 MYL6P60660 151 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 CDK17Q00537 523 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 LRMPQ12912 555 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 GRIK3Q13003 919 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 RAPGEF1Q13905 1077 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 MEA1Q16626 185 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ZNF699Q32M78 642 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 SFMBT2Q5VUG0 894 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 GJB7Q6PEY0 223 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ARHGEF19Q8IW93 802 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 RPUSD2Q8IZ73 545 aaKnown RBP11.45□□□□□ -0.58
LEMD3-202ENST00000539442 PPM1KQ8N3J5 372 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 LPPQ93052 612 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ZFP42Q96MM3 310 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 GAD1Q99259 594 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 BAG1Q99933 345 aaPredicted RBP11.45□□□□□ -0.58
LEMD3-202ENST00000539442 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 NIF3L1Q9GZT8 377 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 FAM124BQ9H5Z6 455 aaPredicted RBP11.45□□□□□ -0.58
LEMD3-202ENST00000539442 UBE2TQ9NPD8 197 aaPredicted RBP11.45□□□□□ -0.58
LEMD3-202ENST00000539442 AIPL1Q9NZN9 384 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 PRKAG2Q9UGJ0 569 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 BRCA2P51587 3418 aa11.45□□□□□ -0.58
LEMD3-202ENST00000539442 ABHD14A-ACY1A0A1B0GW23 586 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 ANO9A1A5B4 782 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 LRRN2O75325 713 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 P4HA1P13674 534 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 FERP16591 822 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 POLR2BP30876 1174 aaKnown RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 SOX5P35711 763 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 CCZ1BP86790 482 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 GOLGA8FQ08AF8 430 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 GOLGA8DPQ0D2H9 430 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 MYO1EQ12965 1108 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 CUL2Q13617 745 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 IKBKEQ14164 716 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 DRAP1Q14919 205 aaPredicted RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 GLB1LQ6UWU2 654 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 NPAS4Q8IUM7 802 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 TMEM139Q8IV31 216 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 RNF169Q8NCN4 708 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 GSTCDQ8NEC7 633 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 SHC3Q92529 594 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 C18orf25Q96B23 403 aaPredicted RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 ZNF560Q96MR9 790 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 CXCL16Q9H2A7 254 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 KANSL3Q9P2N6 904 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 TUBGCP4Q9UGJ1 667 aa11.44□□□□□ -0.58
LEMD3-202ENST00000539442 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
LEMD3-202ENST00000539442 AGAP1Q9UPQ3 857 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms