RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 RAD23BP54727 409 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 C4orf33Q8N1A6 199 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 AP3M2P53677 418 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 TAP1Q03518 808 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 EFHC2Q5JST6 749 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 RBM43Q6ZSC3 357 aaKnown RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 PDCD6IPQ8WUM4 868 aaKnown RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 C18orf8Q96DM3 657 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 MCEEQ96PE7 176 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 BFARQ9NZS9 450 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 ALG6Q9Y672 507 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 HOXC6P09630 235 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 MTM1Q13496 603 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 ARL8AQ96BM9 186 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 CFAP73A6NFT4 308 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 APOL1O14791 398 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 KCNN4O15554 427 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 MOCS2O96007 188 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 LSP1P33241 339 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 CXCL9Q07325 125 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 TMEM199Q8N511 208 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 OPTNQ96CV9 577 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 TSC22D3Q99576 134 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 SENP7Q9BQF6 1050 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 L2HGDHQ9H9P8 463 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 GRB10Q13322 594 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 NCOA4Q13772 614 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 MMGT1Q8N4V1 131 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 PARD3BQ8TEW8 1205 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 SCG3Q8WXD2 468 aaKnown RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 ABTB1Q969K4 478 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 DACT3Q96B18 629 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 YIPF3Q9GZM5 350 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 SUN2Q9UH99 717 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 TMEM253P0C7T8 217 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 RGS7P49802 495 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 EFNA5P52803 228 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 SESN2P58004 480 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-206ENST00000539338 XKR3Q5GH77 459 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 GRAMD1AQ96CP6 724 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 PI4K2AQ9BTU6 479 aa15.31■□□□□ 0.04
CACNB1-206ENST00000539338 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ITIH2P19823 946 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 PID1Q7Z2X4 250 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 RNF135Q8IUD6 432 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CDCA5Q96FF9 252 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 MROH8Q9H579 483 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ARL2BPQ9Y2Y0 163 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ATP9BO43861 1147 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 IRAK1P51617 712 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 TIPINQ9BVW5 301 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 GPR75-ASB3A0A0A6YYF3 556 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 SEPT8Q92599 483 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 FAM96AQ9H5X1 160 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 SUCLA2Q9P2R7 463 aaPredicted RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 AGAP1Q9UPQ3 857 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 NEU2Q9Y3R4 380 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ZBTB22O15209 634 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ASAP2O43150 1006 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 ATN1P54259 1190 aaPredicted RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 SFSWAPQ12872 951 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 KYNUQ16719 465 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 NOP9Q86U38 636 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 IFT43Q96FT9 208 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 COL3A1P02461 1466 aaPredicted RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CDH16O75309 829 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 NR3C2P08235 984 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 DRP2Q13474 957 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 PKN2Q16513 984 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 SYDE1Q6ZW31 735 aaPredicted RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 CCDC124Q96CT7 223 aaKnown RBP15.3■□□□□ 0.04
CACNB1-206ENST00000539338 FBXL21Q9UKT6 434 aa15.3■□□□□ 0.04
CACNB1-206ENST00000539338 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 A0A087X0T9 212 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 FAM228BP0C875 321 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 ADA2Q9NZK5 511 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 KCND2Q9NZV8 630 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 PLAGL2Q9UPG8 496 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 APRTP07741 180 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
CACNB1-206ENST00000539338 NPEPPSP55786 919 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 TSPY1Q01534 308 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 RNF168Q8IYW5 571 aaPredicted RBP15.29■□□□□ 0.04
CACNB1-206ENST00000539338 TTC8Q8TAM2 541 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 YME1L1Q96TA2 773 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms