RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ABCA6Q8N139 1617 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 PHLDB1Q86UU1 1377 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ADGRL2O95490 1459 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 TEX14Q8IWB6 1497 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 SHANK2Q9UPX8 1470 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ADGBQ8N7X0 1667 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MYOM3Q5VTT5 1437 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 CD109Q6YHK3 1445 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 POGZQ7Z3K3 1410 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 SYCP2Q9BX26 1530 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 DEPDC5O75140 1603 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MROH1Q8NDA8 1641 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 PTPN23Q9H3S7 1636 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 LINC00473A8K010 186 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 PJA2O43164 708 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 TMEM127O75204 238 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 TOP3BO95985 862 aaKnown RBP2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 SNRPA1P09661 255 aaKnown RBP2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 NR4A2P43354 598 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 SOX10P56693 466 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 RABEP1Q15276 862 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 FAM153CQ494X1 144 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 KIAA0895LQ68EN5 471 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 TSHZ1Q6ZSZ6 1077 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MEPCEQ7L2J0 689 aaKnown RBP2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 ZZZ3Q8IYH5 903 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 SNX33Q8WV41 574 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 HMCESQ96FZ2 354 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 OXSMQ9NWU1 459 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 EVLQ9UI08 416 aaPredicted RBP2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MSRAQ9UJ68 235 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 SPO11Q9Y5K1 396 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 FANCAO15360 1455 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MAGI2Q86UL8 1455 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 MLH3Q9UHC1 1453 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 VWDEQ8N2E2 1590 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 HECW2Q9P2P5 1572 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 DIP2CQ9Y2E4 1556 aa2.69□□□□□ -1.98
CBX3P4-201ENST00000538909 FGD6Q6ZV73 1430 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 AKNAQ7Z591 1439 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 AGLP35573 1532 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 KDM6BO15054 1643 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 PRSS38A1L453 326 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 LCHNA4D1U4 455 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CHRM2P08172 466 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CYP2D6P10635 497 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 GCSHP23434 173 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CD40P25942 277 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 MMP13P45452 471 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 GPR15P49685 360 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 LINC00205P59089 165 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF460Q14592 562 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 LONRF2Q1L5Z9 754 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CCDC178Q5BJE1 867 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 C19orf54Q5BKX5 351 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 FAM47AQ5JRC9 791 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 ATG9BQ674R7 924 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CREB3L3Q68CJ9 461 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 SUMO4Q6EEV6 95 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 SLC18B1Q6NT16 456 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 VWA1Q6PCB0 445 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 TOR1AIP2Q8NFQ8 470 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF480Q8WV37 535 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF496Q96IT1 587 aaPredicted RBP2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 MRPL4Q9BYD3 311 aaKnown RBP2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 B4GALT6Q9UBX8 382 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 SIK3Q9Y2K2 1263 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 CAMSAP2Q08AD1 1489 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 ADAMTSL3P82987 1691 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 RNF17Q9BXT8 1623 aaKnown RBP2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 EIF2AK4Q9P2K8 1649 aaKnown RBP2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 KDM5DQ9BY66 1539 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 RTEL1-TNFRSF6BF6WH68 1400 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 PTPRKQ15262 1439 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 TRAPPC8Q9Y2L5 1435 aa2.68□□□□□ -1.98
CBX3P4-201ENST00000538909 GCC2Q8IWJ2 1684 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ADGRL1O94910 1474 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF518AQ6AHZ1 1483 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 CCDC141Q6ZP82 1450 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 PLEKHH2Q8IVE3 1493 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ADM5C9JUS6 153 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 WNT10BO00744 389 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 MPPED1O15442 326 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 OPA1O60313 960 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 GASTP01350 101 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 RAP2AP10114 183 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 IGFALSP35858 605 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 PLCD1P51178 756 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 LRRC41Q15345 812 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 DRC7Q8IY82 874 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ACRBPQ8NEB7 543 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 MARS2Q96GW9 593 aaKnown RBP2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 MRI1Q9BV20 369 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 SEMA4CQ9C0C4 833 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 CCDC113Q9H0I3 377 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 VPS16Q9H269 839 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 NCOA5Q9HCD5 579 aaKnown RBP2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 MDFICQ9P1T7 246 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 HSFX1Q9UBD0 423 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms