RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MRPL42Q9Y6G3 142 aaKnown RBP25.33■■□□□ 1.65
TMEM260-202ENST00000538838 ANO9A1A5B4 782 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 GTPBP10A4D1E9 387 aaKnown RBP25.32■■□□□ 1.64
TMEM260-202ENST00000538838 PODXLO00592 558 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 MYL6P60660 151 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 CETN1Q12798 172 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 GBP6Q6ZN66 633 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 UROC1Q96N76 676 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 RAD9AQ99638 391 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 PI4K2AQ9BTU6 479 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 TRIM5Q9C035 493 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 RAB20Q9NX57 234 aa25.32■■□□□ 1.64
TMEM260-202ENST00000538838 LCHNA4D1U4 455 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 CBFA2T2O43439 604 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 IGFBP6P24592 240 aaPredicted RBP25.31■■□□□ 1.64
TMEM260-202ENST00000538838 PBX3P40426 434 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 OR1G1P47890 313 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 RBP5P82980 135 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 UPP1Q16831 310 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 EXOC3L4Q17RC7 722 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
TMEM260-202ENST00000538838 INTS2Q9H0H0 1204 aaKnown RBP25.31■■□□□ 1.64
TMEM260-202ENST00000538838 F8W810 466 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 PIRO00625 290 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 CLSTN1O94985 981 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SLC9A1P19634 815 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SLC11A1P49279 550 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 KLK7P49862 253 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 KCNMA1Q12791 1236 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SYCP1Q15431 976 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 C3orf58Q8NDZ4 430 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 LMO3Q8TAP4 145 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SP7Q8TDD2 431 aaPredicted RBP25.3■■□□□ 1.64
TMEM260-202ENST00000538838 PRG3Q9Y2Y8 225 aaPredicted RBP25.3■■□□□ 1.64
TMEM260-202ENST00000538838 R3HCC1Q9Y3T6 440 aaKnown RBP25.3■■□□□ 1.64
TMEM260-202ENST00000538838 RPL9P32969 192 aaKnown RBP25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SPOUT1Q5T280 376 aaKnown RBP25.3■■□□□ 1.64
TMEM260-202ENST00000538838 SPOPLQ6IQ16 392 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 TDHQ8IZJ6 230 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 HASPINQ8TF76 798 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 ERGIC2Q96RQ1 377 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 XYLT2Q9H1B5 865 aa25.3■■□□□ 1.64
TMEM260-202ENST00000538838 KIF4AO95239 1232 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 TPM3P06753 285 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 MYOGP15173 224 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 PON1P27169 355 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 BCAR1P56945 870 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 APBA1Q02410 837 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 ZNF699Q32M78 642 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 TRIM65Q6PJ69 517 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 LRRC52Q8N7C0 313 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 EHBP1Q8NDI1 1231 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 DDX27Q96GQ7 796 aaKnown RBP25.29■■□□□ 1.64
TMEM260-202ENST00000538838 HPDLQ96IR7 371 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 ZNF560Q96MR9 790 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 TMEM175Q9BSA9 504 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 SIK3Q9Y2K2 1263 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 TSC2P49815 1807 aa25.29■■□□□ 1.64
TMEM260-202ENST00000538838 NRP1O14786 923 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 ASS1P00966 412 aaKnown RBP25.28■■□□□ 1.64
TMEM260-202ENST00000538838 ITGB1P05556 798 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 ZNF75DP51815 510 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 LRMPQ12912 555 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 FIBCD1Q8N539 461 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 LSM14BQ9BX40 385 aaKnown RBP25.28■■□□□ 1.64
TMEM260-202ENST00000538838 IMPG2Q9BZV3 1241 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 PRO3102Q9H379 93 aa25.28■■□□□ 1.64
TMEM260-202ENST00000538838 NT5C1B-RDH14C9J2C7 533 aa25.27■■□□□ 1.64
TMEM260-202ENST00000538838 SPTLC1O15269 473 aa25.27■■□□□ 1.64
TMEM260-202ENST00000538838 B3GAT3O94766 335 aa25.27■■□□□ 1.64
TMEM260-202ENST00000538838 GALTP07902 379 aa25.27■■□□□ 1.64
TMEM260-202ENST00000538838 TAF6P49848 677 aa25.27■■□□□ 1.64
TMEM260-202ENST00000538838 NOP14P78316 857 aaKnown RBP25.27■■□□□ 1.64
TMEM260-202ENST00000538838 PCMTD1Q96MG8 357 aaPredicted RBP25.27■■□□□ 1.64
TMEM260-202ENST00000538838 APOBEC3GQ9HC16 384 aaKnown RBP25.27■■□□□ 1.64
TMEM260-202ENST00000538838 LINC00271P0C7V0 271 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 ATICP31939 592 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 PBX1P40424 430 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 PNPLA4P41247 253 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 MRE11P49959 708 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 SGSM1Q2NKQ1 1148 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 CD300LGQ6UXG3 332 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 TMEM173Q86WV6 379 aaPredicted RBP25.26■■□□□ 1.63
TMEM260-202ENST00000538838 SIX2Q9NPC8 291 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 MARCH5Q9NX47 278 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 FAN1Q9Y2M0 1017 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 A0A1W2PQC6 194 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 LAG3P18627 525 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 LILRA4P59901 499 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 MYO1EQ12965 1108 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 SV2CQ496J9 727 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 WDR44Q5JSH3 913 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 ARHGEF19Q8IW93 802 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 COLGALT1Q8NBJ5 622 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 CCDC150Q8NCX0 1101 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 POLIQ9UNA4 740 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 NUB1Q9Y5A7 615 aa25.26■■□□□ 1.63
TMEM260-202ENST00000538838 ARHGEF15O94989 841 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 STAU1O95793 577 aaKnown RBP25.25■■□□□ 1.63
TMEM260-202ENST00000538838 ALDH2P05091 517 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms