RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CNOT8Q9UFF9 292 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 AMFRQ9UKV5 643 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 CITO14578 2027 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 A0A0A6YYK5 440 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 A6NJR5 290 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 MAGEB2O15479 319 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 PGK1P00558 417 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 FUT8Q9BYC5 575 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 SCN1AP35498 2009 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 CCDC151A5D8V7 595 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 DDX3YO15523 660 aaKnown RBP15.11■□□□□ 0.01
ACTN1-205ENST00000538545 ERLIN2O94905 339 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 GLI1P08151 1106 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 COMTP21964 271 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 CLEC16AQ2KHT3 1053 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 WDR72Q3MJ13 1102 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-205ENST00000538545 HES6Q96HZ4 224 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 PPME1Q9Y570 386 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 O00370 1275 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 ASAP2O43150 1006 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 C6orf222P0C671 652 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-205ENST00000538545 CYP2C9P11712 490 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 UNGP13051 313 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-205ENST00000538545 IFI16Q16666 785 aaKnown RBP15.11■□□□□ 0.01
ACTN1-205ENST00000538545 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 EXOC8Q8IYI6 725 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 USP38Q8NB14 1042 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 USP6NLQ92738 828 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 IMPG2Q9BZV3 1241 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 PCDHB2Q9Y5E7 798 aa15.11■□□□□ 0.01
ACTN1-205ENST00000538545 AOC2O75106 756 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 ZC3H11AO75152 810 aaKnown RBP eCLIP15.1■□□□□ 0.01
ACTN1-205ENST00000538545 F2P00734 622 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 MFSD10Q14728 455 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 ACAD10Q6JQN1 1059 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 DPH6Q7L8W6 267 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 TFAP2BQ92481 460 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
ACTN1-205ENST00000538545 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 TJP2Q9UDY2 1190 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 ZEB2O60315 1214 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 NPTXRO95502 500 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 FGGP02679 453 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 IBSPP21815 317 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-205ENST00000538545 C8orf74Q6P047 294 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 ZNF606Q8WXB4 792 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 SDCBP2Q9H190 292 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 SNTG2Q9NY99 539 aa15.1■□□□□ 0.01
ACTN1-205ENST00000538545 PPEF2O14830 753 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 GZMAP12544 262 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 HOXD8P13378 290 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-205ENST00000538545 AKAP5P24588 427 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 HOXA11P31270 313 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-205ENST00000538545 PSMC4P43686 418 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ASPAP45381 313 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 MMS22LQ6ZRQ5 1243 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 TWNKQ96RR1 684 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 CELF4Q9BZC1 486 aaKnown RBP15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ZFYVE28Q9HCC9 887 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ERVK-5Q9HDB9 667 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 LAMA3Q16787 3333 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 RAD51CO43502 376 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 GPR32O75388 356 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 POLR2BP30876 1174 aaKnown RBP15.09■□□□□ 0.01
ACTN1-205ENST00000538545 MMGT1Q8N4V1 131 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 TRIB2Q92519 343 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ANKRD36BP1Q96IX9 119 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ADAMTS10Q9H324 1103 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
ACTN1-205ENST00000538545 TCRBV7S2A1N4TA0A589 114 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 TNNC2P02585 160 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 SCP2P22307 547 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 TNNT3P45378 269 aaPredicted RBP15.08■□□□□ 0.01
ACTN1-205ENST00000538545 BRD3Q15059 726 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 CXCL17Q6UXB2 119 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 ENOSF1Q7L5Y1 443 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 CATSPER4Q7RTX7 472 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 DDX42Q86XP3 938 aaKnown RBP eCLIP15.08■□□□□ 0.01
ACTN1-205ENST00000538545 FMNL3Q8IVF7 1028 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 MCOLN2Q8IZK6 566 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 C1orf131Q8NDD1 294 aaKnown RBP15.08■□□□□ 0.01
ACTN1-205ENST00000538545 ZMAT2Q96NC0 199 aaKnown RBP15.08■□□□□ 0.01
ACTN1-205ENST00000538545 NXF3Q9H4D5 531 aaKnown RBP15.08■□□□□ 0.01
ACTN1-205ENST00000538545 L1RE1Q9UN81 338 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0.01
ACTN1-205ENST00000538545 B4GALT4O60513 344 aa15.08■□□□□ 0
ACTN1-205ENST00000538545 RGS2P41220 211 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms