RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CSF2RAP15509 400 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TBXAS1P24557 533 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ATICP31939 592 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PBX1P40424 430 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PNPLA4P41247 253 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SCNN1GP51170 649 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 WNT7BP56706 349 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MYL6P60660 151 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CLDN10P78369 228 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GOLGA8FQ08AF8 430 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GOLGA8DPQ0D2H9 430 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 C1orf220Q5T0J3 134 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EFCAB13Q8IY85 973 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 HPDLQ96IR7 371 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PDLIM2Q96JY6 352 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRAIPQ9BWF2 469 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MTIF3Q9H2K0 278 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TMEM161AQ9NX61 479 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CNTN3Q9P232 1028 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
TNFRSF1A-211ENST00000538363 A0A1W2PQJ5 194 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MFAP3LO75121 409 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CST3P01034 146 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CXCL10P02778 98 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ACRP10323 421 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SYN1P17600 705 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYP3A5P20815 502 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GUCY2FP51841 1108 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DRAP1Q14919 205 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SV2CQ496J9 727 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NOMO2Q5JPE7 1267 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 IQCEQ6IPM2 695 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FAM117BQ6P1L5 589 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DSTYKQ6XUX3 929 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 AGMOQ6ZNB7 445 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RTN4RL1Q86UN2 441 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 VPS36Q86VN1 386 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NPAS4Q8IUM7 802 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BADQ92934 168 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 C18orf25Q96B23 403 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FAM84AQ96KN4 292 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZFP42Q96MM3 310 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BAG1Q99933 345 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.45□□□□□ -0.586e-7■□□□□ 9.6
TNFRSF1A-211ENST00000538363 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ELAC1Q9H777 363 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 IL23AQ9NPF7 189 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SEPT11Q9NVA2 429 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PUF60Q9UHX1 559 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 COQ4Q9Y3A0 265 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PCDHB4Q9Y5E5 795 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FHOD1Q9Y613 1164 aa11.45□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PTPRJQ12913 1337 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 HUS1O60921 280 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GFPT2O94808 682 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GYPCP04921 128 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FGFR1P11362 822 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FERP16591 822 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TAF6P49848 677 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FAM189BP81408 668 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 APBA1Q02410 837 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 KLHL30Q0D2K2 578 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GRIK3Q13003 919 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TBX2Q13207 712 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SPOPLQ6IQ16 392 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PDXDC1Q6P996 788 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ALKAL1Q6UXT8 129 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SCARA5Q6ZMJ2 495 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ARHGEF19Q8IW93 802 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 C1orf127Q8N9H9 656 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TATDN2Q93075 761 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 UROC1Q96N76 676 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZNF830Q96NB3 372 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ABHD10Q9NUJ1 306 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TUBGCP4Q9UGJ1 667 aa11.44□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ARHGEF37A1IGU5 675 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CASTOR2A6NHX0 329 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MEIS3P2A8K0S8 358 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 AKR1B10O60218 316 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms