RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TMC7Q7Z402 723 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 DNERQ8NFT8 737 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 BPIFA3Q9BQP9 254 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 DRC3Q9H069 523 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 WTIPA6NIX2 430 aaPredicted RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 H3BRB1 525 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 KITP10721 976 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 MYL4P12829 197 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 PNPLA4P41247 253 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 FSCN1Q16658 493 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 RNF10Q8N5U6 811 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 TMEM117Q9H0C3 514 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 TUT1Q9H6E5 874 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 NOVA2Q9UNW9 492 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 PODXLO00592 558 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 SLC26A4O43511 780 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 GAS2O43903 313 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 CTDNEP1O95476 244 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 STK4Q13043 487 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 PPIL2Q13356 520 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 CDH18Q13634 790 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 APOBEC3HQ6NTF7 200 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 MPZL3Q6UWV2 235 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 PPM1NQ8N819 430 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 PDZD8Q8NEN9 1154 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 DPF2Q92785 391 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 THOC1Q96FV9 657 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 CLMNQ96JQ2 1002 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 ITM2BQ9Y287 266 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 COPEO14579 308 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ATMINO43313 823 aaPredicted RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 FKTNO75072 461 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 AP1G2O75843 785 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 THP07101 528 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 KLRC2P26717 231 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 KLK7P49862 253 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 CNTN2Q02246 1040 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 PDIA2Q13087 525 aaKnown RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 DGKZQ13574 1117 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SRRM1Q8IYB3 904 aaKnown RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 RAB42Q8N4Z0 105 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SYT2Q8N9I0 419 aaPredicted RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 ASAP3Q8TDY4 903 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 CALR3Q96L12 384 aaKnown RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 TACO1Q9BSH4 297 aaKnown RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 SNTG2Q9NY99 539 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SALL1Q9NSC2 1324 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 AKAP5P24588 427 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 WEE1P30291 646 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SREBF1P36956 1147 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ACADSBP45954 432 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 LAMTOR4Q0VGL1 99 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SMTNL2Q2TAL5 461 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 MAP3K21Q5TCX8 1036 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 RGMBQ6NW40 437 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 METTL7BQ6UX53 244 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 USP49Q70CQ1 688 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ADGRF2Q8IZF7 708 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 CARNMT1Q8N4J0 409 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 RABGGTAQ92696 567 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 FBXO32Q969P5 355 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ERLEC1Q96DZ1 483 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SPDL1Q96EA4 605 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 RSRC1Q96IZ7 334 aaKnown RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 STK33Q9BYT3 514 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 MID2Q9UJV3 735 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 FHOD1Q9Y613 1164 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 CFLARO15519 480 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 PTPRAP18433 802 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 CYP11B2P19099 503 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ARHGAP25P42331 645 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 NAMPTP43490 491 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 SP3Q02447 781 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 FMR1Q06787 632 aaKnown RBP eCLIP5.65□□□□□ -1.51
LRP6-203ENST00000538239 ART3Q13508 389 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 BTG3Q14201 252 aaPredicted RBP5.65□□□□□ -1.51
LRP6-203ENST00000538239 ADCK2Q7Z695 626 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 NLGN2Q8NFZ4 835 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 TRAPPC12Q8WVT3 735 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ARHGAP23Q9P227 1491 aa5.65□□□□□ -1.51
LRP6-203ENST00000538239 ANP32DO95626 131 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ALDH2P05091 517 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 INSRRP14616 1297 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 PSEN2P49810 448 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ARSEP51690 589 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 MAP3K7CLP57077 242 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 APBA1Q02410 837 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ACOT1Q86TX2 421 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ZBED8Q8IZ13 594 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ARHGAP18Q8N392 663 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 SLC35G2Q8TBE7 412 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 NIF3L1Q9GZT8 377 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CATSPERBQ9H7T0 1116 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 BAIAP2L1Q9UHR4 511 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 FAM47DPA6NHR8 397 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 STRNO43815 780 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 RHOBTB3O94955 611 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 FDPSP14324 419 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 EPHB3P54753 998 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms