RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 DLATP10515 647 aaKnown RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 CTSAP10619 480 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 RPL17P18621 184 aaKnown RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 FGFR3P22607 806 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 POLR2BP30876 1174 aaKnown RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 NLRP12P59046 1061 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 CLDN10P78369 228 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 UBE3AQ05086 875 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 DLX2Q07687 328 aaPredicted RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 KCNC3Q14003 757 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 COL19A1Q14993 1142 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 CCDC142Q17RM4 750 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 CCDC183Q5T5S1 534 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 IRF2BP1Q8IU81 584 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 CD302Q8IX05 232 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 GOLGA5Q8TBA6 731 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 DHTKD1Q96HY7 919 aaPredicted RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 GAS2L1Q99501 681 aaPredicted RBP14.16□□□□□ -0.14
CHFR-216ENST00000538235 FUCA2Q9BTY2 467 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 SLC38A7Q9NVC3 462 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 STXBP5LQ9Y2K9 1186 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 OBSL1O75147 1896 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 C2CD2LO14523 706 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 TBX10O75333 385 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 CST3P01034 146 aaPredicted RBP14.15□□□□□ -0.14
CHFR-216ENST00000538235 LTBRP36941 435 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 DSG1Q02413 1049 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 PAK1Q13153 545 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 ADAM9Q13443 819 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 MYBPC2Q14324 1141 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 FAM171A1Q5VUB5 890 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 DCLRE1AQ6PJP8 1040 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 RBM23Q86U06 439 aaKnown RBP14.15□□□□□ -0.14
CHFR-216ENST00000538235 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 BEST2Q8NFU1 509 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 MAFAQ8NHW3 353 aaPredicted RBP14.15□□□□□ -0.14
CHFR-216ENST00000538235 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 SUSD3Q96L08 255 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 UROC1Q96N76 676 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 RTP3Q9BQQ7 232 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 COLEC11Q9BWP8 271 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 ENTPD7Q9NQZ7 604 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 CDH22Q9UJ99 828 aa14.15□□□□□ -0.14
CHFR-216ENST00000538235 TIMM13Q9Y5L4 95 aaPredicted RBP14.15□□□□□ -0.14
CHFR-216ENST00000538235 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.158e-6■■■■■ 107
CHFR-216ENST00000538235 TCF20Q9UGU0 1960 aaKnown RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 GREB1Q4ZG55 1949 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 M0QZQ0 153 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 PSMA7O14818 248 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 C4BPAP04003 597 aaKnown RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 CNPP09543 421 aaKnown RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 NRIP1P48552 1158 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 GLUD2P49448 558 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 LILRA4P59901 499 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 LRRC63Q05C16 580 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 BFSP1Q12934 665 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 NFKBIBQ15653 356 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 DUSP6Q16828 381 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 KLHL40Q2TBA0 621 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 TRAPPC11Q7Z392 1133 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 OSTM1Q86WC4 334 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 LNX1Q8TBB1 728 aaPredicted RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
CHFR-216ENST00000538235 KIAA1586Q9HCI6 787 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
CHFR-216ENST00000538235 PATJQ8NI35 1801 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 TULP1O00294 542 aaPredicted RBP14.13□□□□□ -0.15
CHFR-216ENST00000538235 MAPK13O15264 365 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 TEX28O15482 410 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
CHFR-216ENST00000538235 TADA2AO75478 443 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 VNN2O95498 520 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
CHFR-216ENST00000538235 CDR1P51861 262 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 ZACNQ401N2 412 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 CBWD6Q4V339 395 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 CBWD3Q5JTY5 395 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 CBWD5Q5RIA9 395 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 TMC7Q7Z402 723 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 GLYCTKQ8IVS8 523 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 MRPL43Q8N983 215 aaKnown RBP14.13□□□□□ -0.15
CHFR-216ENST00000538235 TMC2Q8TDI7 906 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 RIN2Q8WYP3 895 aaPredicted RBP14.13□□□□□ -0.15
CHFR-216ENST00000538235 PIK3R5Q8WYR1 880 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 KLHL5Q96PQ7 755 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 TMEM209Q96SK2 561 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 CLSTN3Q9BQT9 956 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 HSD3B7Q9H2F3 369 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 RWDD2AQ9UIY3 292 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 AGAP1Q9UPQ3 857 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 IRAK3Q9Y616 596 aa14.13□□□□□ -0.15
CHFR-216ENST00000538235 KIF20AO95235 890 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms