RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 TPGS2Q68CL5 300 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 SLC39A4Q6P5W5 647 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 NT5DC4Q86YG4 428 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 KBTBD4Q9NVX7 518 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 EPS15L1Q9UBC2 864 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 PCDHB8Q9UN66 801 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 C2CD2Q9Y426 696 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 DENND4AQ7Z401 1863 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 C2orf16Q68DN1 1984 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 PDCD11Q14690 1871 aaKnown RBP23.31■■□□□ 1.32
CCDC78-215ENST00000538176 I3L4J1 428 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 TBC1D4O60343 1298 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 ABLIM3O94929 683 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 GCNT3O95395 438 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 IGFBP6P24592 240 aaPredicted RBP23.31■■□□□ 1.32
CCDC78-215ENST00000538176 GBP2P32456 591 aaPredicted RBP23.31■■□□□ 1.32
CCDC78-215ENST00000538176 ZNF280DQ6N043 979 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 SUGP1Q8IWZ8 645 aaKnown RBP23.31■■□□□ 1.32
CCDC78-215ENST00000538176 POMGNT1Q8WZA1 660 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 PRRX2Q99811 253 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 FAM13BQ9NYF5 915 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 TUBGCP4Q9UGJ1 667 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 TECTAO75443 2155 aa23.31■■□□□ 1.32
CCDC78-215ENST00000538176 MYH15Q9Y2K3 1946 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 A0A087X0B3 334 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 ANKRD63C9JTQ0 380 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 M0QZQ0 153 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 ADAM12O43184 909 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 MYBP10242 640 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 ATF2P15336 505 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 TDGQ13569 410 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 SYCP3Q8IZU3 236 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 FAM212AQ96EL1 285 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 ASIC4Q96FT7 647 aa23.3■■□□□ 1.32
CCDC78-215ENST00000538176 KIAA0391O15091 583 aaKnown RBP23.29■■□□□ 1.32
CCDC78-215ENST00000538176 IL18RAPO95256 599 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 GARTP22102 1010 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 AARSP49588 968 aaKnown RBP eCLIP23.29■■□□□ 1.32
CCDC78-215ENST00000538176 ACOT2P49753 483 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 SPAG1Q07617 926 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 TMEM132DQ14C87 1099 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 E2F4Q16254 413 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 CTXN3Q4LDR2 81 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 FOXD4L5Q5VV16 416 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-215ENST00000538176 CNNM4Q6P4Q7 775 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 FBXL6Q8N531 539 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 SLC7A14Q8TBB6 771 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 FOXD4L4Q8WXT5 416 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-215ENST00000538176 KCNK12Q9HB15 430 aa23.29■■□□□ 1.32
CCDC78-215ENST00000538176 OAZ2O95190 189 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 FSHRP23945 695 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 ME1P48163 572 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 ROR1Q01973 937 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 YWHAHQ04917 246 aaPredicted RBP23.28■■□□□ 1.32
CCDC78-215ENST00000538176 ZBTB41Q5SVQ8 909 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 JADE1Q6IE81 842 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 SHC4Q6S5L8 630 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 RSPO2Q6UXX9 243 aaPredicted RBP23.28■■□□□ 1.32
CCDC78-215ENST00000538176 DSTYKQ6XUX3 929 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 USP37Q86T82 979 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 TCEAL8Q8IYN2 117 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 TBC1D7Q9P0N9 293 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 FBXL5Q9UKA1 691 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 RCOR1Q9UKL0 485 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 KCNH3Q9ULD8 1083 aa23.28■■□□□ 1.32
CCDC78-215ENST00000538176 ASGR2P07307 311 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 LAMP2P13473 410 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 TYMPP19971 482 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 ADSSP30520 456 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 GRASPQ7Z6J2 395 aaPredicted RBP23.27■■□□□ 1.32
CCDC78-215ENST00000538176 FEZF2Q8TBJ5 459 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 DHX58Q96C10 678 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 FAM122AQ96E09 287 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 TRIM9Q9C026 710 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 PCDHA7Q9UN72 937 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 POLIQ9UNA4 740 aa23.27■■□□□ 1.32
CCDC78-215ENST00000538176 TRIOO75962 3097 aa23.27■■□□□ 1.31
CCDC78-215ENST00000538176 PRRG1O14668 218 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 LRG1P02750 347 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 NUBP1P53384 320 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 LILRA4P59901 499 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 C7orf25Q9BPX7 421 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 AFF4Q9UHB7 1163 aaKnown RBP23.26■■□□□ 1.31
CCDC78-215ENST00000538176 RAPGEFL1Q9UHV5 662 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 ATP6V1DQ9Y5K8 247 aa23.26■■□□□ 1.31
CCDC78-215ENST00000538176 WDR27A2RRH5 827 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 OR6C75A6NL08 312 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 PIRO00625 290 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 CCL16O15467 120 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 N4BP1O75113 896 aaKnown RBP23.25■■□□□ 1.31
CCDC78-215ENST00000538176 C9orf57Q5W0N0 161 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 SPRYD3Q8NCJ5 442 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 CACTINQ8WUQ7 758 aaKnown RBP23.25■■□□□ 1.31
CCDC78-215ENST00000538176 MYADMQ96S97 322 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 AVENQ9NQS1 362 aaPredicted RBP23.25■■□□□ 1.31
CCDC78-215ENST00000538176 DSEQ9UL01 958 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 CDH7Q9ULB5 785 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 DUSP12Q9UNI6 340 aa23.25■■□□□ 1.31
CCDC78-215ENST00000538176 ANO9A1A5B4 782 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 POLR2DO15514 142 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms