RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ASAP2O43150 1006 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 PDHBP11177 359 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 WEE1P30291 646 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ALDH7A1P49419 539 aaKnown RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 AP3M2P53677 418 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 POLE2P56282 527 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 MTF1Q14872 753 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 AARS2Q5JTZ9 985 aaKnown RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 FRMD5Q7Z6J6 570 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TEX12Q9BXU0 123 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 APRTP07741 180 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF286BP0CG31 522 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ZFXP17010 805 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 DAB2P98082 770 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 FLOT2Q14254 428 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 NAF1Q96HR8 494 aaKnown RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ING2Q9H160 280 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TMEM60Q9H2L4 133 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 EML4Q9HC35 981 aaKnown RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 BFARQ9NZS9 450 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 FBXO2Q9UK22 296 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 PKP3Q9Y446 797 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TECPR2O15040 1411 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 DCTN3O75935 186 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.52
LINC00346-201ENST00000538077 LPAR1Q92633 364 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.52
LINC00346-201ENST00000538077 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.52
LINC00346-201ENST00000538077 VCPKMTQ9H867 229 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.52
LINC00346-201ENST00000538077 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 LCMT1Q9UIC8 334 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.52
LINC00346-201ENST00000538077 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00346-201ENST00000538077 GTF2H1P32780 548 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 TKFCQ3LXA3 575 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.53
LINC00346-201ENST00000538077 SENP7Q9BQF6 1050 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 RAD18Q9NS91 495 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 THEGQ9P2T0 379 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 WARS2Q9UGM6 360 aaKnown RBP11.77□□□□□ -0.53
LINC00346-201ENST00000538077 AURKCQ9UQB9 309 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 EPB42P16452 691 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 MZF1P28698 734 aaPredicted RBP11.77□□□□□ -0.53
LINC00346-201ENST00000538077 SOAT1P35610 550 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
LINC00346-201ENST00000538077 GTF2A2P52657 109 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 CARNMT1Q8N4J0 409 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 AMACRQ9UHK6 382 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 CCDC188H7C350 402 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 RGL2O15211 777 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 DGAT1O75907 488 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 STYK1Q6J9G0 422 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM62Q9BVG3 475 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 JMJD4Q9H9V9 463 aa11.77□□□□□ -0.53
LINC00346-201ENST00000538077 PJA2O43164 708 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 NDUFS3O75489 264 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ALX1Q15699 326 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ZNF34Q8IZ26 560 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FOPNLQ96NB1 174 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 MED15Q96RN5 788 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM10Q9UDY6 481 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FBXO38Q6PIJ6 1188 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM72Q6ZMU5 477 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 PTPRN2Q92932 1015 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ERAP1Q9NZ08 941 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 NTSR2O95665 410 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 HIST1H2AGP0C0S8 130 aaPredicted RBP11.76□□□□□ -0.53
LINC00346-201ENST00000538077 HIST1H2ADP20671 130 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 BTKQ06187 659 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 HIST1H2AHQ96KK5 128 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 HIST1H2AJQ99878 128 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 H2AFJQ9BTM1 129 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 LATS2Q9NRM7 1088 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 RASA1P20936 1047 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 NPEPPSP55786 919 aa11.76□□□□□ -0.53
LINC00346-201ENST00000538077 TAP1Q03518 808 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms