RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 COLEC11Q9BWP8 271 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 PBX4Q9BYU1 374 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 COQ4Q9Y3A0 265 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 LINC01553A4QN01 128 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
CNN1-202ENST00000535659 VNN1O95497 513 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 POLR2BP30876 1174 aaKnown RBP16.79■□□□□ 0.28
CNN1-202ENST00000535659 PBX2P40425 430 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 FANCCQ00597 558 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 NCOA4Q13772 614 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 TAS1R2Q8TE23 839 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 ZNF558Q96NG5 402 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
CNN1-202ENST00000535659 YBX2Q9Y2T7 364 aaKnown RBP16.79■□□□□ 0.28
CNN1-202ENST00000535659 LAMA3Q16787 3333 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 NT5C1B-RDH14C9J2C7 533 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 PPEF2O14830 753 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 B3GAT3O94766 335 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 HLA-DRAP01903 254 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 CA3P07451 260 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 LINC00271P0C7V0 271 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 BMPR1AP36894 532 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 MYL6P60660 151 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
CNN1-202ENST00000535659 MYL7Q01449 175 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 SGSM1Q2NKQ1 1148 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 FILIP1LQ4L180 1135 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 COLGALT1Q8NBJ5 622 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
CNN1-202ENST00000535659 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
CNN1-202ENST00000535659 PCDHB12Q9Y5F1 795 aa16.78■□□□□ 0.28
CNN1-202ENST00000535659 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
CNN1-202ENST00000535659 TDRD15B5MCY1 1934 aaKnown RBP16.77■□□□□ 0.28
CNN1-202ENST00000535659 TMEM189-UBE2V1I3L0A0 370 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 TADA2AO75478 443 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 PAX3P23760 479 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
CNN1-202ENST00000535659 ATICP31939 592 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 PBX3P40426 434 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 PNPLA4P41247 253 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 LILRA4P59901 499 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 MYO1EQ12965 1108 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 CD300LGQ6UXG3 332 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 EHBP1Q8NDI1 1231 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 SEMA4DQ92854 862 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 HPDLQ96IR7 371 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
CNN1-202ENST00000535659 RWDD3Q9Y3V2 267 aa16.77■□□□□ 0.28
CNN1-202ENST00000535659 GTPBP10A4D1E9 387 aaKnown RBP16.76■□□□□ 0.27
CNN1-202ENST00000535659 LGALS16A8MUM7 142 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 F8W810 466 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 KIF4AO95239 1232 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 STAU1O95793 577 aaKnown RBP16.76■□□□□ 0.27
CNN1-202ENST00000535659 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 TAF6P49848 677 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 UBASH3AP57075 661 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 TAP1Q03518 808 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 NR1I3Q14994 352 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 FKBP15Q5T1M5 1219 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 C3orf58Q8NDZ4 430 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 TAF4BQ92750 862 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 ZNF560Q96MR9 790 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 XYLT2Q9H1B5 865 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 NKX2-4Q9H2Z4 354 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
CNN1-202ENST00000535659 A0A1B0GTH6 734 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 KPNA7A9QM74 516 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SPTLC1O15269 473 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 LRRN2O75325 713 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 ARHGEF15O94989 841 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 ITGB1P05556 798 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 UBXN1Q04323 297 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 WDR44Q5JSH3 913 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SLC39A11Q8N1S5 342 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SAMD11Q96NU1 681 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
CNN1-202ENST00000535659 CRACR2AQ9BSW2 395 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 PLVAPQ9BX97 442 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SLC28A3Q9HAS3 691 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 MARCH5Q9NX47 278 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 IFNKQ9P0W0 207 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 ADAM28Q9UKQ2 775 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 TEX33O43247 280 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 ASS1P00966 412 aaKnown RBP16.75■□□□□ 0.27
CNN1-202ENST00000535659 RB1P06400 928 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 PPM1AP35813 382 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms