RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 ELMOD1Q8N336 334 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 SLC7A14Q8TBB6 771 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 POMGNT1Q8WZA1 660 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 PANK2Q9BZ23 570 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
KNTC1-208ENST00000535410 RAPGEFL1Q9UHV5 662 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
KNTC1-208ENST00000535410 KCNH3Q9ULD8 1083 aa12.9□□□□□ -0.34
KNTC1-208ENST00000535410 C5orf42Q9H799 3197 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 I3L4J1 428 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 KIAA0391O15091 583 aaKnown RBP12.89□□□□□ -0.35
KNTC1-208ENST00000535410 ABLIM3O94929 683 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 IL18RAPO95256 599 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 GCNT3O95395 438 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 LRG1P02750 347 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 ASGR2P07307 311 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 LAMP2P13473 410 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 ATF2P15336 505 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
KNTC1-208ENST00000535410 L1TD1Q5T7N2 865 aaKnown RBP12.89□□□□□ -0.35
KNTC1-208ENST00000535410 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
KNTC1-208ENST00000535410 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
KNTC1-208ENST00000535410 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 FIZ1Q96SL8 496 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
KNTC1-208ENST00000535410 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 M0QZQ0 153 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ZNF197O14709 1029 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ADAM12O43184 909 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 OAZ2O95190 189 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 PTPN2P17706 415 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 TYMPP19971 482 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 GARTP22102 1010 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 TNFSF9P41273 254 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ACOT2P49753 483 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ARPP19P56211 112 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ROR1Q01973 937 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
KNTC1-208ENST00000535410 IQCEQ6IPM2 695 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 ARMCX5Q6P1M9 558 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
KNTC1-208ENST00000535410 PDILTQ8N807 584 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 CYP4F11Q9HBI6 524 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 WNT16Q9UBV4 365 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
KNTC1-208ENST00000535410 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 DSEQ9UL01 958 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 DUSP12Q9UNI6 340 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
KNTC1-208ENST00000535410 TECTAO75443 2155 aa12.88□□□□□ -0.35
KNTC1-208ENST00000535410 MUC6Q6W4X9 2439 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ANKRD63C9JTQ0 380 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 CCL16O15467 120 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 FAM189A1O60320 539 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 PPP1R37O75864 691 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 F13A1P00488 732 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ODC1P11926 461 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 CPB1P15086 417 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 RFX1P22670 979 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 AVPR2P30518 371 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ME1P48163 572 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
KNTC1-208ENST00000535410 CLCN5P51795 746 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 PTPN5P54829 565 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 SPAG1Q07617 926 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 PLD1Q13393 1074 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 JADE1Q6IE81 842 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 METTL23Q86XA0 190 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 SLC44A3Q8N4M1 653 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ZNF512Q96ME7 567 aaPredicted RBP12.87□□□□□ -0.35
KNTC1-208ENST00000535410 MYADMQ96S97 322 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 STRA6Q9BX79 667 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
KNTC1-208ENST00000535410 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ATP6V1DQ9Y5K8 247 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 MYH11P35749 1972 aa12.87□□□□□ -0.35
KNTC1-208ENST00000535410 ZDBF2Q9HCK1 2354 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms