RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 FSCN3Q9NQT6 498 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 HELLSQ9NRZ9 838 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 PCDHA6Q9UN73 950 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 IPPQ9Y573 584 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 PCDHA8Q9Y5H6 950 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 PLXND1Q9Y4D7 1925 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 AKAP9Q99996 3911 aa8.4□□□□□ -1.07
CPSF7-214ENST00000535222 MTORP42345 2549 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 LRG1P02750 347 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 AFPP02771 609 aaKnown RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 CFIP05156 583 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 ZNF883P0CG24 379 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 FGFR3P22607 806 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 MLH1P40692 756 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 HAND2P61296 217 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 CXADRP78310 365 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TNK2Q07912 1038 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TMPRSS12Q86WS5 348 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 ARID3BQ8IVW6 561 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TEX2Q8IWB9 1127 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 SMAP1Q8IYB5 467 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TSTD1Q8NFU3 115 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 OR2I1PQ8NGU4 316 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 RPLP0P6Q8NHW5 317 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TTC8Q8TAM2 541 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 EZH1Q92800 747 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 FGF11Q92914 225 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 ZFYVE19Q96K21 471 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 FAM83CQ9BQN1 747 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TPSD1Q9BZJ3 242 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 PSTPIP2Q9H939 334 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 NRBP2Q9NSY0 501 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TBX20Q9UMR3 447 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 PCDHA10Q9Y5I2 948 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 STK24Q9Y6E0 443 aa8.39□□□□□ -1.07
CPSF7-214ENST00000535222 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
CPSF7-214ENST00000535222 CRYBG3Q68DQ2 2970 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 F8P00451 2351 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 OTOL1A6NHN0 477 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-214ENST00000535222 ATXN1LP0C7T5 689 aaKnown RBP8.38□□□□□ -1.07
CPSF7-214ENST00000535222 KIF5BP33176 963 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 GALK1P51570 392 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 GRIK3Q13003 919 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 TEAD2Q15562 447 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
CPSF7-214ENST00000535222 CEP57Q86XR8 500 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 SPACA3Q8IXA5 215 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 MIER1Q8N108 512 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 SHKBP1Q8TBC3 707 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 CDC6Q99741 560 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 PAAF1Q9BRP4 392 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 CEP72Q9P209 647 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 MAFFQ9ULX9 164 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 SSUH2Q9Y2M2 353 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
CPSF7-214ENST00000535222 HELZP42694 1942 aaKnown RBP8.38□□□□□ -1.07
CPSF7-214ENST00000535222 TTC41PQ6P2S7 1318 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 FAM149AA5PLN7 773 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 SPDYE3A6NKU9 549 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 PLK4O00444 970 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 SEC24AO95486 1093 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 OATP04181 439 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 PSAPP07602 524 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 AMPD2Q01433 879 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 SCRN1Q12765 414 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.071e-15■■■■■ 80.2
CPSF7-214ENST00000535222 PREPLQ4J6C6 727 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-214ENST00000535222 TSHZ3Q63HK5 1081 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 LMBRD2Q68DH5 695 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-214ENST00000535222 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 SRGAP1Q7Z6B7 1085 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 CCDC26Q8TAB7 109 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 PI4K2BQ8TCG2 481 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 CCDC51Q96ER9 411 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 LIN37Q96GY3 246 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-214ENST00000535222 ZNF512Q96ME7 567 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-214ENST00000535222 SPZ1Q9BXG8 430 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 NIFKQ9BYG3 293 aaKnown RBP8.37□□□□□ -1.07
CPSF7-214ENST00000535222 ZDHHC5Q9C0B5 715 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 NRSN2Q9GZP1 204 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 HPS4Q9NQG7 708 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 INSL5Q9Y5Q6 135 aa8.37□□□□□ -1.07
CPSF7-214ENST00000535222 NID2Q14112 1375 aa8.36□□□□□ -1.07
CPSF7-214ENST00000535222 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
CPSF7-214ENST00000535222 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-214ENST00000535222 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms