RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ERLEC1Q96DZ1 483 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 MMRN2Q9H8L6 949 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 NLRC4Q9NPP4 1024 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 GINM1Q9NU53 330 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 MRGBPQ9NV56 204 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 FAF1Q9UNN5 650 aaPredicted RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 TRAF3IP3Q9Y228 551 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 C5orf42Q9H799 3197 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC25-GNG10A0A024R161 153 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 RGS16O15492 202 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MAP3K13O43283 966 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC6O75061 913 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC8O75937 253 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SHBGP04278 402 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 KRT16P08779 473 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SETDB1Q15047 1291 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 BMT2Q1RMZ1 405 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 ZBTB41Q5SVQ8 909 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 ODR4Q5SWX8 454 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MTHFD1LQ6UB35 978 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 RIOX2Q8IUF8 465 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CYTH2Q99418 400 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 OCEL1Q9H607 264 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 ACP6Q9NPH0 428 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 HOXC10Q9NYD6 342 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SPATA7Q9P0W8 599 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 COL4A3BPQ9Y5P4 624 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MAFGO15525 162 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 EIF4BP23588 611 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MAGEA1P43355 309 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 QARSP47897 775 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 TNNC1P63316 161 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 TSPY1Q01534 308 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MKRN4PQ13434 485 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 TRADDQ15628 312 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CCDC65Q8IXS2 484 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MAGEC3Q8TD91 643 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CCDC51Q96ER9 411 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 ERGIC2Q96RQ1 377 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 NAP1L4Q99733 375 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 GPR88Q9GZN0 384 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC17Q9NVM6 304 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 WDR35Q9P2L0 1181 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 GOLGA8IPA6NC78 632 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 GOLGA8JA6NMD2 632 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 FARP2O94887 1054 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SUN1O94901 812 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 NR3C1P04150 777 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 GLI1P08151 1106 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 SP100P23497 879 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CTGFP29279 349 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 OAZ1P54368 228 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 MCL1Q07820 350 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 DMPKQ09013 629 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CCDC80Q76M96 950 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 NIPA1Q7RTP0 329 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 NSUN6Q8TEA1 469 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 PRMT1Q99873 361 aaKnown RBP9.61□□□□□ -0.87
SF3B2-216ENST00000534765 OLFML3Q9NRN5 406 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
SF3B2-216ENST00000534765 ADRB2P07550 413 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 CHN1P15882 459 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 IREB2P48200 963 aaKnown RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 CYP2J2P51589 502 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PEX3P56589 373 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 LRRC63Q05C16 580 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 LRRC8CQ8TDW0 803 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PRPF31Q8WWY3 499 aaKnown RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 TMEM143Q96AN5 459 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 GANQ9H2C0 597 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 AGPAT3Q9NRZ7 376 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 GFPT2O94808 682 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 CCND2P30279 289 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 CLCN2P51788 898 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PPIL2Q13356 520 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 MEA1Q16626 185 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 SEZ6Q53EL9 994 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 ANO7Q6IWH7 933 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 GBP7Q8N8V2 638 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 ERMNQ8TAM6 284 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 RAB3IPQ96QF0 476 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 CENPOQ9BU64 300 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 AP1M1Q9BXS5 423 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PARVGQ9HBI0 331 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms