RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NAT14Q8WUY8 206 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 LRRC37BQ96QE4 947 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 STK32BQ9NY57 414 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 FAM170AA1A519 330 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 RIPK2O43353 540 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 PABPC4LP0CB38 370 aaKnown RBP20.34■□□□□ 0.85
SMPD1-210ENST00000534405 PSMC2P35998 433 aaKnown RBP20.34■□□□□ 0.85
SMPD1-210ENST00000534405 CBWD6Q4V339 395 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 CBWD3Q5JTY5 395 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 CBWD5Q5RIA9 395 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 SLFN11Q7Z7L1 901 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 FBXO25Q8TCJ0 367 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 DDX50Q9BQ39 737 aaKnown RBP20.34■□□□□ 0.85
SMPD1-210ENST00000534405 PARVGQ9HBI0 331 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 SPATA7Q9P0W8 599 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 MAP3K7O43318 606 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 ARP10275 920 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 IDO1P14902 403 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 PTPN4P29074 926 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 P3H1Q32P28 736 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 MARK2Q7KZI7 788 aaKnown RBP20.33■□□□□ 0.85
SMPD1-210ENST00000534405 ZNF720Q7Z2F6 126 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 WDR60Q8WVS4 1066 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 ARHGEF2Q92974 986 aaKnown RBP20.33■□□□□ 0.85
SMPD1-210ENST00000534405 CLMNQ96JQ2 1002 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 CATSPER2Q96P56 530 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 USH1CQ9Y6N9 552 aa20.33■□□□□ 0.85
SMPD1-210ENST00000534405 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.33■□□□□ 0.84
SMPD1-210ENST00000534405 CLRN2A0PK11 232 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 MAPK13O15264 365 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 ATP9BO43861 1147 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 H2AFZP0C0S5 128 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 ZCCHC18P0CG32 403 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 FMO5P49326 533 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 PRELPP51888 382 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 KLC3Q6P597 504 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 H2AFVQ71UI9 128 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 MIGA2Q7L4E1 593 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 SLC30A5Q8TAD4 765 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 UNC45AQ9H3U1 944 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 TMX2Q9Y320 296 aa20.33■□□□□ 0.84
SMPD1-210ENST00000534405 FRMPD4Q14CM0 1322 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 H0YIN7 160 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 KIAA0391O15091 583 aaKnown RBP20.32■□□□□ 0.84
SMPD1-210ENST00000534405 GAS7O60861 476 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 POLR2MP0CAP2 368 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 POTEJP0CG39 1038 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 TRIM49P0CI25 452 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 TRIM49CP0CI26 452 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 VAV1P15498 845 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 NCCRP1Q6ZVX7 275 aaPredicted RBP20.32■□□□□ 0.84
SMPD1-210ENST00000534405 SPATA24Q86W54 205 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 GDAP1Q8TB36 358 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 AGAP3Q96P47 875 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 TUBGCP5Q96RT8 1024 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 GPR88Q9GZN0 384 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 LNPEPQ9UIQ6 1025 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 CAPN9O14815 690 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 DCTN3O75935 186 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 CREB1P16220 341 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 CYP2J2P51589 502 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 GALCP54803 685 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 PEX26Q7Z412 305 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 GLYCTKQ8IVS8 523 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 ANKRD42Q8N9B4 389 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 PPP2R3CQ969Q6 453 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 AGBL1Q96MI9 1066 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 OSGEPQ9NPF4 335 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 AGPAT3Q9NRZ7 376 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 STX18Q9P2W9 335 aaKnown RBP20.32■□□□□ 0.84
SMPD1-210ENST00000534405 ZNF212Q9UDV6 495 aa20.32■□□□□ 0.84
SMPD1-210ENST00000534405 hCG_2014768A0A024R1R8 64 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 HNRNPCP07910 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 ZFXP17010 805 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 ATP5DP30049 168 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 SOX5P35711 763 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 STAT1P42224 750 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 DHX34Q14147 1143 aaKnown RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 DRAP1Q14919 205 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 ZYXQ15942 572 aaKnown RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 NFIL3Q16649 462 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 CEP55Q53EZ4 464 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 STYK1Q6J9G0 422 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 DUS1LQ6P1R4 473 aaKnown RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 KBTBD2Q8IY47 623 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 NME8Q8N427 588 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 KCTD17Q8N5Z5 321 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 UHMK1Q8TAS1 419 aaKnown RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 CORO1BQ9BR76 489 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 PITPNM3Q9BZ71 974 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 MLXIPLQ9NP71 852 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 KRT82Q9NSB4 513 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 GRHL1Q9NZI5 618 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 DNAJC12Q9UKB3 198 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 STARD13Q9Y3M8 1113 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 TPD52L2O43399 206 aaKnown RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 TBX10O75333 385 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms