RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 DSTYKQ6XUX3 929 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 USP37Q86T82 979 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 NT5DC4Q86YG4 428 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 BRSK2Q8IWQ3 736 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 C3orf58Q8NDZ4 430 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 SLC22A17Q8WUG5 538 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 CACTINQ8WUQ7 758 aaKnown RBP14.5□□□□□ -0.09
CAPN1-227ENST00000533909 SCFD1Q8WVM8 642 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 RIPOR3Q96MK2 946 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 MAN1C1Q9NR34 630 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 AGPAT3Q9NRZ7 376 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 HSPBP1Q9NZL4 362 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 CGNQ9P2M7 1197 aaKnown RBP14.5□□□□□ -0.09
CAPN1-227ENST00000533909 PRKAG3Q9UGI9 489 aa14.5□□□□□ -0.09
CAPN1-227ENST00000533909 ARHGEF37A1IGU5 675 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 TNFRSF10AO00220 468 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 KINO60870 393 aaKnown RBP14.49□□□□□ -0.09
CAPN1-227ENST00000533909 SMC2O95347 1197 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 ADRB2P07550 413 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 EHHADHQ08426 723 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 CBX2Q14781 532 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-227ENST00000533909 SURF1Q15526 300 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 ZBTB6Q15916 424 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 BMT2Q1RMZ1 405 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 ATAT1Q5SQI0 421 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 SYCE2Q6PIF2 218 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 CRELD2Q6UXH1 353 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-227ENST00000533909 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 ADHFE1Q8IWW8 467 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 C12orf76Q8N812 135 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-227ENST00000533909 LNX1Q8TBB1 728 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-227ENST00000533909 NECTIN4Q96NY8 510 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 ADAM7Q9H2U9 754 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 PLEKHA4Q9H4M7 779 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 RMND1Q9NWS8 449 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 DPP3Q9NY33 737 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 CDY1Q9Y6F8 540 aa14.49□□□□□ -0.09
CAPN1-227ENST00000533909 CLIC2O15247 247 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 TGM5O43548 720 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 KLRC4O43908 158 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 TMEM191BP0C7N4 346 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 PAX3P23760 479 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 OR1D2P34982 312 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 HOXD13P35453 343 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 MTHFRP42898 656 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 ARPP19P56211 112 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 DPYDQ12882 1025 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 STK4Q13043 487 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 CTXN3Q4LDR2 81 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
CAPN1-227ENST00000533909 C9orf57Q5W0N0 161 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 ZNF280DQ6N043 979 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 TMC5Q6UXY8 1006 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 FMR1NBQ8N0W7 255 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-227ENST00000533909 GJD3Q8N144 294 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 XXYLT1Q8NBI6 393 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 PIDD1Q9HB75 910 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 MTRRQ9UBK8 725 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 PCDHB8Q9UN66 801 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 VCANP13611 3396 aa14.48□□□□□ -0.09
CAPN1-227ENST00000533909 PDCD11Q14690 1871 aaKnown RBP14.47□□□□□ -0.09
CAPN1-227ENST00000533909 EXOC3O60645 756 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 C1RP00736 705 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 TNNC2P02585 160 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 ODC1P11926 461 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 IGFBP6P24592 240 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-227ENST00000533909 SNRNP35Q16560 246 aaKnown RBP14.47□□□□□ -0.09
CAPN1-227ENST00000533909 CD300LGQ6UXG3 332 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 CBWD2Q8IUF1 395 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 RDH13Q8NBN7 331 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 KIAA0895Q8NCT3 520 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 KREMEN2Q8NCW0 462 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 HDAC7Q8WUI4 952 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 ANKRD36BP1Q96IX9 119 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 RPGRIP1Q96KN7 1286 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 ZNF560Q96MR9 790 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 FNBP1Q96RU3 617 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 CLSTN3Q9BQT9 956 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 PHF7Q9BWX1 381 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-227ENST00000533909 S1PR5Q9H228 398 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 PDE11AQ9HCR9 933 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 BACE2Q9Y5Z0 518 aa14.47□□□□□ -0.09
CAPN1-227ENST00000533909 TGFB1I1O43294 461 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 CALUO43852 315 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-227ENST00000533909 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 CLSTN1O94985 981 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 KRT19P08727 400 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 WEE2P0C1S8 567 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 DLATP10515 647 aaKnown RBP14.46□□□□□ -0.09
CAPN1-227ENST00000533909 ELF1P32519 619 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 PNPLA4P41247 253 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 TAF6P49848 677 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 YWHAHQ04917 246 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-227ENST00000533909 ZP2Q05996 745 aa14.46□□□□□ -0.09
CAPN1-227ENST00000533909 PNOCQ13519 176 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms