RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 POMGNT1Q8WZA1 660 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 SUSD3Q96L08 255 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 FIZ1Q96SL8 496 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 MFSD1Q9H3U5 465 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 WDR27A2RRH5 827 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 NARSO43776 548 aaKnown RBP11.34□□□□□ -0.59
CAPN1-225ENST00000533704 FAM189A1O60320 539 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 LRG1P02750 347 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 NFICP08651 508 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ZSCAN22P10073 491 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-225ENST00000533704 CPB1P15086 417 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 TMEM132DQ14C87 1099 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 IER5LQ5T953 404 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 JADE1Q6IE81 842 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 SLFN12LQ6IEE8 588 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ZNF720Q7Z2F6 126 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 SYCP3Q8IZU3 236 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 FLCNQ8NFG4 579 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 BEST2Q8NFU1 509 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ING5Q8WYH8 240 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 KCNN1Q92952 543 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 DHX58Q96C10 678 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 HCFC1R1Q9NWW0 138 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN1-225ENST00000533704 IGSF9Q9P2J2 1179 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 FBXL5Q9UKA1 691 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
CAPN1-225ENST00000533704 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-225ENST00000533704 TSC2P49815 1807 aa11.34□□□□□ -0.59
CAPN1-225ENST00000533704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-225ENST00000533704 PPEF2O14830 753 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 PPP6R2O75170 966 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 F13A1P00488 732 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 CFHP08603 1231 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 LAMP2P13473 410 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 CYP3A5P20815 502 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 RFX1P22670 979 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 AVPR2P30518 371 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 LRPAP1P30533 357 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 HOXA9P31269 272 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 KCNA1Q09470 495 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 PABPC1LQ4VXU2 614 aaKnown RBP11.33□□□□□ -0.6
CAPN1-225ENST00000533704 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 USP37Q86T82 979 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 ITFG1Q8TB96 612 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 HVCN1Q96D96 273 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 ST6GALNAC4Q9H4F1 302 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 EPS15L1Q9UBC2 864 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 DUSP12Q9UNI6 340 aa11.33□□□□□ -0.6
CAPN1-225ENST00000533704 MORC2Q9Y6X9 1032 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-225ENST00000533704 STK25O00506 426 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CUTAO60888 179 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PPP1R37O75864 691 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PAPLNO95428 1278 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 SEC24AO95486 1093 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 YEATS4O95619 227 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CASP5P51878 434 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 ASIC1P78348 528 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PKP1Q13835 747 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 L1TD1Q5T7N2 865 aaKnown RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CD302Q8IX05 232 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 SIX5Q8N196 739 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PRSS33Q8NF86 280 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 FGF13Q92913 245 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PGLYRP2Q96PD5 576 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CORO1BQ9BR76 489 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 KCNH6Q9H252 994 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 DNMT3BQ9UBC3 853 aaKnown RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CDH7Q9ULB5 785 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 MRPS23Q9Y3D9 190 aaKnown RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-225ENST00000533704 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
CAPN1-225ENST00000533704 PIEZO1Q92508 2521 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms