RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 AKAP3O75969 853 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 MBD3O95983 291 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 DLATP10515 647 aaKnown RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 TKTP29401 623 aaKnown RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 CA8P35219 290 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 PPP1R2P41236 205 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 ADAM9Q13443 819 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 STIM1Q13586 685 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 CEP135Q66GS9 1140 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 PRSS55Q6UWB4 352 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 WDR49Q8IV35 697 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 ZC3H3Q8IXZ2 948 aaKnown RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-214ENST00000533209 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 SUSD3Q96L08 255 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 CGRRF1Q99675 332 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 TTPALQ9BTX7 342 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 IGFLR1Q9H665 355 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 RXFP1Q9HBX9 757 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 SIX4Q9UIU6 781 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.33
SSBP3-214ENST00000533209 ANK1P16157 1881 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 SPTLC1O15269 473 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 LINC01565O15544 149 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 CLASP2O75122 1294 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 TMEM191BP0C7N4 346 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 PSMC2P35998 433 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 LILRA4P59901 499 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 ADAM15Q13444 863 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 KCNC3Q14003 757 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 DUOXA2Q1HG44 320 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 KLHL10Q6JEL2 608 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 CSGALNACT2Q8N6G5 542 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 VN1R2Q8NFZ6 395 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 NELFBQ8WX92 580 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 EEF2KMTQ96G04 330 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 FNBP1Q96RU3 617 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 CDCA3Q99618 268 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 TSG101Q99816 390 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
SSBP3-214ENST00000533209 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
SSBP3-214ENST00000533209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 LRRIQ3A6PVS8 624 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 M0QZQ0 153 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 SYN3O14994 580 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 CETN3O15182 167 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 TEX28O15482 410 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 NCK2O43639 380 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 GLP2RO95838 553 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 TNNC2P02585 160 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 ITGB3P05106 788 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 TNNI1P19237 187 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 PAX3P23760 479 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 LTBRP36941 435 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 MCCD1P59942 119 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 DLG4P78352 724 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 CLDN10P78369 228 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 RBM10P98175 930 aaKnown RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 FKBP3Q00688 224 aaKnown RBP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 PSMD5Q16401 504 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 TTI2Q6NXR4 508 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 FAM186BQ8IYM0 893 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 BORCS6Q96GS4 357 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 MKNK1Q9BUB5 465 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSBP3-214ENST00000533209 CLDND1Q9NY35 253 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 FNIP2Q9P278 1114 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 AGAP1Q9UPQ3 857 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 CTNND2Q9UQB3 1225 aa12.94□□□□□ -0.34
SSBP3-214ENST00000533209 PNPLA4P41247 253 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 TAF6P49848 677 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 VAMP7P51809 220 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms