RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.53	□□□□□ -0.72
PPFIA1-223	ENST00000532793	PIEZO1	Q92508	2521 aa		10.52	□□□□□ -0.72
PPFIA1-223	ENST00000532793	PP2D1	A8MPX8	630 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CLDN3	O15551	220 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ADAM12	O43184	909 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	XPOT	O43592	962 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	TOM1L1	O75674	476 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CENPB	P07199	599 aa	Predicted RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	DCN	P07585	359 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CPB1	P15086	417 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PTPN2	P17706	415 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CDC25A	P30304	524 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RPL9	P32969	192 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	GPC5	P78333	572 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ROR1	Q01973	937 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRKCQ	Q04759	706 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RAD51AP2	Q09MP3	1159 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SNW1	Q13573	536 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	UBXN2B	Q14CS0	331 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RABEP1	Q15276	862 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	MLF2	Q15773	248 aa	Predicted RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CTXN3	Q4LDR2	81 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	IQCE	Q6IPM2	695 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ZNF280D	Q6N043	979 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ADSSL1	Q8N142	457 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	APPL2	Q8NEU8	664 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PJA1	Q8NG27	643 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ING5	Q8WYH8	240 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	KXD1	Q9BQD3	176 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RUSC1	Q9BVN2	902 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CYP4F11	Q9HBI6	524 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	HCFC1R1	Q9NWW0	138 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	LARS	Q9P2J5	1176 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ARHGAP28	Q9P2N2	729 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	DNMT3B	Q9UBC3	853 aa	Known RBP	10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	TCHH	Q07283	1943 aa		10.52	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PATJ	Q8NI35	1801 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	KANSL1L	A0AUZ9	987 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	VWA3A	A6NCI4	1184 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SFI1	A8K8P3	1242 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ZNF197	O14709	1029 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	NCAM2	O15394	837 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	WFS1	O76024	890 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	LMNA	P02545	664 aa	Known RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	KRT18	P05783	430 aa	Known RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RHO	P08100	348 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PLS3	P13797	630 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	KCNE1	P15382	129 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	GUCY2C	P25092	1073 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	TOB1	P50616	345 aa	Predicted RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	STARD6	P59095	220 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PPP2R3A	Q06190	1150 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CYP4A22	Q5TCH4	519 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SLC8B1	Q6J4K2	584 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ZPBP2	Q6X784	338 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	C1orf186	Q6ZWK4	172 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PDZD4	Q76G19	769 aa	Predicted RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	NPAS3	Q8IXF0	933 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	C3orf58	Q8NDZ4	430 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ITFG1	Q8TB96	612 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SPIRE2	Q8WWL2	714 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	MCRS1	Q96EZ8	462 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CALML4	Q96GE6	196 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PLIN2	Q99541	437 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PTPRH	Q9HD43	1115 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	GDE1	Q9NZC3	331 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	CNTN3	Q9P232	1028 aa		10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	MRPS17	Q9Y2R5	130 aa	Known RBP	10.51	□□□□□ -0.73
PPFIA1-223	ENST00000532793	FANCM	Q8IYD8	2048 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	NOTCH4	Q99466	2003 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	WDR27	A2RRH5	827 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	LAMTOR5	O43504	91 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	WIPF1	O43516	503 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ECI2	O75521	394 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ATF2	P15336	505 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	UBA7	P41226	1012 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	MAGEA9	P43362	315 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	LIG4	P49917	911 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRR20E	P86478	221 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRR20C	P86479	221 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRR20D	P86480	221 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRR20B	P86481	221 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	PRR20A	P86496	221 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ATP2C1	P98194	919 aa	Predicted RBP	10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	FOXK2	Q01167	660 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SOX4	Q06945	474 aa	Predicted RBP	10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	KYAT1	Q16773	422 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SLC44A4	Q53GD3	710 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	XKR4	Q5GH76	650 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	LCE2C	Q5TA81	110 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	TPGS2	Q68CL5	300 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ALKAL1	Q6UXT8	129 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	USP37	Q86T82	979 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	C1orf210	Q8IVY1	113 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	DAW1	Q8N136	415 aa		10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	SYT2	Q8N9I0	419 aa	Predicted RBP	10.5	□□□□□ -0.73
PPFIA1-223	ENST00000532793	ZNF512	Q96ME7	567 aa	Predicted RBP	10.5	□□□□□ -0.73

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