RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 WNT7AO00755 349 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 OGTO15294 1046 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 LPXNO60711 386 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 STX1BP61266 288 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 SH2D4BQ5SQS7 431 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 HAS1Q92839 578 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 TNFRSF25Q93038 417 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 XPO6Q96QU8 1125 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 ROPN1BQ9BZX4 212 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 ROPN1Q9HAT0 212 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 DCTN4Q9UJW0 460 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 FRMPD4Q14CM0 1322 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 MAPTP10636 758 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC12A3P55017 1021 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 TSPY1Q01534 308 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC29A2Q14542 456 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 Q9H521 79 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 SYNPO2Q9UMS6 1093 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 SIK3Q9Y2K2 1263 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 RALAP11233 206 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 NCF2P19878 526 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 RGS7P49802 495 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 SNAPC2Q13487 334 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 ARHGEF6Q15052 776 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 ANKRD13AQ8IZ07 590 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 KCNMB3Q9NPA1 279 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 DHX38Q92620 1227 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 FAM118BQ9BPY3 351 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 FAM198AQ9UFP1 575 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 ZFP69BQ9UJL9 534 aa16.15■□□□□ 0.18
PCDHA3-202ENST00000532566 TCP11X1B4DZS4 312 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 PIK3R2O00459 728 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 CYP3A4P08684 503 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 ITGA8P53708 1063 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 SCN4BQ8IWT1 228 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 TLR10Q9BXR5 811 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 VPS11Q9H270 941 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 FGFR1OP2Q9NVK5 253 aa16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 SMG5Q9UPR3 1016 aaKnown RBP16.14■□□□□ 0.18
PCDHA3-202ENST00000532566 HSPA4LO95757 839 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 SV2AQ7L0J3 742 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 NIPA1Q7RTP0 329 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 PRMT1Q99873 361 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 PABPC3Q9H361 631 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 GYG2O15488 501 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 HAUS5O94927 633 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 BRD2P25440 801 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 AP1B1Q10567 949 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 NME3Q13232 169 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 RGPD8O14715 1765 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 CASQ2O14958 399 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 KCNN4O15554 427 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 PJA2O43164 708 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 CST8O60676 142 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 LCP1P13796 627 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 MX2P20592 715 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 SLC20A1Q8WUM9 679 aa16.14■□□□□ 0.17
PCDHA3-202ENST00000532566 PGM5Q15124 567 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 FKBP1CQ5VVH2 108 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 C1orf131Q8NDD1 294 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 ARHGEF26Q96DR7 871 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SGSM3Q96HU1 749 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 BTBD6Q96KE9 485 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 RAB6BQ9NRW1 208 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 NOP53Q9NZM5 478 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 RBP3P10745 1247 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 ARFIP2P53365 341 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SEC24CP53992 1094 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 CYP24A1Q07973 514 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SEZ6Q53EL9 994 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 LRRC55Q6ZSA7 311 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SPATA21Q7Z572 469 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 CDR2LQ86X02 465 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 POP1Q99575 1024 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 FAM96AQ9H5X1 160 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 ETNK1Q9HBU6 452 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 G3BP2Q9UN86 482 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 PHF20L1A8MW92 1017 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 OPHN1O60890 802 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 SLC4A1P02730 911 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 PAMP19021 973 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 MAGEA4P43358 317 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 DRP2Q13474 957 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 ATP8B4Q8TF62 1192 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
PCDHA3-202ENST00000532566 TRIM56Q9BRZ2 755 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 743.7 ms