RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GLRA4Q5JXX5 417 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 C18orf25Q96B23 403 aaPredicted RBP23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 HAUS4Q9H6D7 363 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 KCND1Q9NSA2 647 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 DAAM1Q9Y4D1 1078 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 ZNF263O14978 683 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 NBNO60934 754 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 NDUFA10O95299 355 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 CSF2RAP15509 400 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 RFX1P22670 979 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 YARSP54577 528 aaKnown RBP23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 MFAP3P55082 362 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 ZNF571Q7Z3V5 609 aaPredicted RBP23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 REXO1L1PQ8IX06 675 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 LPPQ93052 612 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 ADAM2Q99965 735 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 IFIH1Q9BYX4 1025 aaKnown RBP23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 SPTLC3Q9NUV7 552 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 PPP2R2CQ9Y2T4 447 aa23.61■■□□□ 1.37
PACSIN3-209ENST00000532457 SMIM28A0A1B0GU29 152 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 CXCL10P02778 98 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 ITGB3P05106 788 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 ZSCAN20P17040 1043 aaPredicted RBP23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 AFF1P51825 1210 aaKnown RBP23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 NOP14P78316 857 aaKnown RBP23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 GCNT1Q02742 428 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 PTK2Q05397 1052 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 KLHL30Q0D2K2 578 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 MAPK8IP2Q13387 824 aaPredicted RBP23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 MRPL10Q7Z7H8 261 aaKnown RBP23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 OLIG1Q8TAK6 271 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 SHC3Q92529 594 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 APBB2Q92870 758 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 DPP3Q9NY33 737 aa23.6■■□□□ 1.37
PACSIN3-209ENST00000532457 KRT19P08727 400 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 PRKCIP41743 596 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 TRPC3Q13507 836 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 SGSM1Q2NKQ1 1148 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 DEFB128Q7Z7B8 93 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 FAM71AQ8IYT1 594 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 SEPT8Q92599 483 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 ZFP42Q96MM3 310 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 TRAIPQ9BWF2 469 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 IL23AQ9NPF7 189 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 ACP6Q9NPH0 428 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 C1orf112Q9NSG2 853 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 TUBGCP4Q9UGJ1 667 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 ATF7P17544 494 aaPredicted RBP23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 ACO1P21399 889 aaKnown RBP23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 CLCN1P35523 988 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 PLEKHG4Q58EX7 1191 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 AGMOQ6ZNB7 445 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 CCDC170Q8IYT3 715 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 GSTCDQ8NEC7 633 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 CCDC42Q96M95 316 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 MIOSQ9NXC5 875 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 DERAQ9Y315 318 aa23.59■■□□□ 1.37
PACSIN3-209ENST00000532457 PTGESO14684 152 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 KCNE1P15382 129 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 CYP27A1Q02318 531 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 NT5DC4Q86YG4 428 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 LINC01599Q8WXQ3 324 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 PPP1R13BQ96KQ4 1090 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 AGAP1Q9UPQ3 857 aa23.58■■□□□ 1.37
PACSIN3-209ENST00000532457 A0A0U1RQF3 1178 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 SSU72P8A0A1W2PR75 194 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 PPEF2O14830 753 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 CYP26A1O43174 497 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 ZNF623O75123 536 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 ABL1P00519 1130 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 CALCAP01258 141 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 FERP16591 822 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 POLR2BP30876 1174 aaKnown RBP23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 SOX4Q06945 474 aaPredicted RBP23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 CUL2Q13617 745 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 TCTN1Q2MV58 587 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 TDRD12Q587J7 1177 aaKnown RBP23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 SYT11Q9BT88 431 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 FTHL17Q9BXU8 183 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 POLIQ9UNA4 740 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 TFR2Q9UP52 801 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 LTBP2Q14767 1821 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 RALGAPA2Q2PPJ7 1873 aa23.57■■□□□ 1.36
PACSIN3-209ENST00000532457 EIF3CLB5ME19 914 aaKnown RBP23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 ITGA4P13612 1032 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 USP8P40818 1118 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 KIF11P52732 1056 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 GFPT1Q06210 699 aaPredicted RBP23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 CNKSR3Q6P9H4 555 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 DBF4BQ8NFT6 615 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 EIF3CQ99613 913 aaKnown RBP23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 SCN5AQ14524 2016 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 ZNF699Q32M78 642 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 GAD1Q99259 594 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 RGS18Q9NS28 235 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 ADAMTS1Q9UHI8 967 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 ITGA11Q9UKX5 1188 aa23.56■■□□□ 1.36
PACSIN3-209ENST00000532457 CEP290O15078 2479 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 A0A087X0T9 212 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 LCA5LO95447 670 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 459.4 ms