RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TJAP1Q5JTD0 557 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 C9orf57Q5W0N0 161 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 ANKRD54Q6NXT1 300 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 NT5DC4Q86YG4 428 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 SLC9A9Q8IVB4 645 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 GUF1Q8N442 669 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 GSDMAQ96QA5 445 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 RBAKQ9NYW8 714 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 SSX2IPQ9Y2D8 614 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 NCOR1O75376 2440 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 ZNF233A6NK53 670 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 M0QZQ0 153 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 MBTPS2O43462 519 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 C1RP00736 705 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 NDUFV1P49821 464 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 CYP2J2P51589 502 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 LILRA4P59901 499 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 AAK1Q2M2I8 961 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 ZCWPW2Q504Y3 356 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 COBLL1Q53SF7 1204 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 KIAA1841Q6NSI8 718 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 LLGL2Q6P1M3 1020 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 HS2ST1Q7LGA3 356 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 SMYD4Q8IYR2 804 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 XXYLT1Q8NBI6 393 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 SMRP1Q8NCR6 262 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 BEST2Q8NFU1 509 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 MFSD14AQ96MC6 490 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 EMILIN2Q9BXX0 1053 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 DPP3Q9NY33 737 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 MAPK8IP1Q9UQF2 711 aa15.1■□□□□ 0.01
TSPAN4-220ENST00000532375 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 SYN3O14994 580 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 PAPLNO95428 1278 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 IL9P15248 144 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 BMP6P22004 513 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 KLRC2P26717 231 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 CYP24A1Q07973 514 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 CLUL1Q15846 466 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 SNRNP35Q16560 246 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 NFIL3Q16649 462 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 PTCRAQ6ISU1 281 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 EP400NLQ6ZTU2 488 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 RDH13Q8NBN7 331 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 OR5B17Q8NGF7 314 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 GOLGA5Q8TBA6 731 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 SUSD6Q92537 303 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 CASP10Q92851 521 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 LMBRD1Q9NUN5 540 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 INTS13Q9NVM9 706 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 SIX4Q9UIU6 781 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 CD207Q9UJ71 328 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 TTC28Q96AY4 2481 aa15.09■□□□□ 0.01
TSPAN4-220ENST00000532375 TGM5O43548 720 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 KINO60870 393 aaKnown RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 HOXB8P17481 243 aaPredicted RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 CA8P35219 290 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 PRCPP42785 496 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 CASP4P49662 377 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 MCCD1P59942 119 aaPredicted RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 SMAD4Q13485 552 aaKnown RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 MYBPC2Q14324 1141 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 PSMD6Q15008 389 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 PSMD5Q16401 504 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 VARS2Q5ST30 1063 aaKnown RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 LMBRD2Q68DH5 695 aaPredicted RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 C12orf76Q8N812 135 aaPredicted RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 CCDC47Q96A33 483 aaKnown RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 POP1Q99575 1024 aaKnown RBP15.08■□□□□ 0
TSPAN4-220ENST00000532375 CDH22Q9UJ99 828 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 MAN1B1Q9UKM7 699 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 NUB1Q9Y5A7 615 aa15.08■□□□□ 0
TSPAN4-220ENST00000532375 C2orf16Q68DN1 1984 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 OAZ2O95190 189 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 NR3C1P04150 777 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 ADH1AP07327 375 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 MCM4P33991 863 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 CLDN10P78369 228 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 TFAMQ00059 246 aaKnown RBP15.07■□□□□ 0
TSPAN4-220ENST00000532375 RAB33AQ14088 237 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 SURF1Q15526 300 aa15.07■□□□□ 0
TSPAN4-220ENST00000532375 SMAD2Q15796 467 aaKnown RBP15.07■□□□□ 0
TSPAN4-220ENST00000532375 PUS10Q3MIT2 529 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms