RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 C1orf186Q6ZWK4 172 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SPRED2Q7Z698 418 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ECHDC2Q86YB7 292 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 LINC00301Q8NCQ3 95 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZDHHC1Q8WTX9 485 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 BSNDQ8WZ55 320 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF689Q96CS4 500 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 EPSTI1Q96J88 318 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 IFT74Q96LB3 600 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 C17orf80Q9BSJ5 609 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RUSC1Q9BVN2 902 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 TIPINQ9BVW5 301 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCSER1Q9C0I3 900 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 C2orf40Q9H1Z8 148 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RC3H2Q9HBD1 1191 aaKnown RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 POLD4Q9HCU8 107 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 AGPAT5Q9NUQ2 364 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 KCND2Q9NZV8 630 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PFDN2Q9UHV9 154 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 CFAP45Q9UL16 551 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RWDD3Q9Y3V2 267 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 HRH3Q9Y5N1 445 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 MORC2Q9Y6X9 1032 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 TET1Q8NFU7 2136 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 KAT6AQ92794 2004 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 MYH9P35579 1960 aaKnown RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 EPOPA6NHQ4 379 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 SPTLC2O15270 562 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 B4GALT5O43286 388 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PPP6R2O75170 966 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 RFPL3O75679 317 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 YEATS4O95619 227 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PF4P02776 101 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ADH1AP07327 375 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 GARTP22102 1010 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 HOXA11P31270 313 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CTNNB1P35222 781 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 DDIT3P35638 169 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 BMPR1AP36894 532 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 LIG3P49916 1009 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 EFNA5P52803 228 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLC12A3P55017 1021 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PEX3P56589 373 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CENPCQ03188 943 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PRPF4BQ13523 1007 aaKnown RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ADGRE1Q14246 886 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 MAPK6Q16659 721 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 EPC2Q52LR7 807 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 SPOUT1Q5T280 376 aaKnown RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 KIAA0319Q5VV43 1072 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 RRAGBQ5VZM2 374 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CDCA2Q69YH5 1023 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 NOTUMQ6P988 496 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 USP49Q70CQ1 688 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF598Q86UK7 904 aaKnown RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TMEM192Q8IY95 271 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM169BQ8N8A8 192 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 C3orf58Q8NDZ4 430 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CNNM3Q8NE01 707 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 MAFAQ8NHW3 353 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TTC8Q8TAM2 541 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 KCNG4Q8TDN1 519 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 GDPD5Q8WTR4 605 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 RAD54LQ92698 747 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC51Q96ER9 411 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CPB2Q96IY4 423 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TRIM56Q9BRZ2 755 aaKnown RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 KIFC3Q9BVG8 833 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TRIM6Q9C030 488 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 TMEM117Q9H0C3 514 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 FZD8Q9H461 694 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 C17orf75Q9HAS0 396 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 AAASQ9NRG9 546 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM105AQ9NUU6 356 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PRMT7Q9NVM4 692 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZIM2Q9NZV7 527 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZMYM5Q9UJ78 669 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 PCDHB2Q9Y5E7 798 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 ATP6V1DQ9Y5K8 247 aa6.34□□□□□ -1.39
HMGB1P42-201ENST00000532126 SCINQ9Y6U3 715 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms