RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 PPP2R3CQ969Q6 453 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
KNL1-208ENST00000532056 MTMR12Q9C0I1 747 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 CHST7Q9NS84 486 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 ITGA11Q9UKX5 1188 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 SSX2IPQ9Y2D8 614 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 NUB1Q9Y5A7 615 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
KNL1-208ENST00000532056 C2orf71A6NGG8 1288 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 HIDE1A8MVS5 230 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 PPEF2O14830 753 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 SYN3O14994 580 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 LILRB3O75022 631 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 CXCL14O95715 111 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 ITGB3P05106 788 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 EPB41P11171 864 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 KRT13P13646 458 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 FGFR3P22607 806 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 POLR2BP30876 1174 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 PNPLA4P41247 253 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 BRCC3P46736 316 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 AP3M2P53677 418 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 MCCD1P59942 119 aaPredicted RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 CLDN10P78369 228 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 DPCR1Q3MIW9 517 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 TCEAL5Q5H9L2 206 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 FAM171A1Q5VUB5 890 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 KIAA0319Q5VV43 1072 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 PDXDC1Q6P996 788 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 TAS1R1Q7RTX1 841 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 MICALL1Q8N3F8 863 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 MRPL43Q8N983 215 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 CXorf38Q8TB03 319 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 SUSD3Q96L08 255 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 ZNF560Q96MR9 790 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 CEP63Q96MT8 703 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 POP1Q99575 1024 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 DUSP9Q99956 384 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 MRPL17Q9NRX2 175 aaKnown RBP10.86□□□□□ -0.67
KNL1-208ENST00000532056 RWDD2AQ9UIY3 292 aa10.86□□□□□ -0.67
KNL1-208ENST00000532056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
KNL1-208ENST00000532056 FSD2A1L4K1 749 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 I3L4J1 428 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 M0QZQ0 153 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 IKBKBO14920 756 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CA8P35219 290 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 TAF6P49848 677 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 VAMP7P51809 220 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 STX17P56962 302 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 LILRA4P59901 499 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 DLG4P78352 724 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 RBP5P82980 135 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CREMQ03060 361 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 BFSP1Q12934 665 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 SV2CQ496J9 727 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CT47A1Q5JQC4 288 aaPredicted RBP10.85□□□□□ -0.67
KNL1-208ENST00000532056 RTP2Q5QGT7 225 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 KIAA1841Q6NSI8 718 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
KNL1-208ENST00000532056 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 ADGRD2Q7Z7M1 963 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CSGALNACT2Q8N6G5 542 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 LRRC52Q8N7C0 313 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 AUTS2Q8WXX7 1259 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 PIK3R5Q8WYR1 880 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 EEF2KMTQ96G04 330 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 BORCS6Q96GS4 357 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 CDCA3Q99618 268 aaPredicted RBP10.85□□□□□ -0.67
KNL1-208ENST00000532056 RXFP1Q9HBX9 757 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.85□□□□□ -0.67
KNL1-208ENST00000532056 SIX4Q9UIU6 781 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 PCDHB8Q9UN66 801 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 TSC2P49815 1807 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
KNL1-208ENST00000532056 REV3LO60673 3130 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 C2CD2LO14523 706 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 SPTLC1O15269 473 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 KRT19P08727 400 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 ODC1P11926 461 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 ERCC5P28715 1186 aaPredicted RBP10.84□□□□□ -0.67
KNL1-208ENST00000532056 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
KNL1-208ENST00000532056 NRIP1P48552 1158 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 HYAL1Q12794 435 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
KNL1-208ENST00000532056 PSMD5Q16401 504 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 STX1AQ16623 288 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 DUSP6Q16828 381 aa10.84□□□□□ -0.67
KNL1-208ENST00000532056 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms