RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 RSPH3Q86UC2 560 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 FAM43AQ8N2R8 423 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATM-217ENST00000531957 NUP133Q8WUM0 1156 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 PNKPQ96T60 521 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 AIFM2Q9BRQ8 373 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 VSX1Q9NZR4 365 aaPredicted RBP4.45□□□□□ -1.7
ATM-217ENST00000531957 TLK1Q9UKI8 766 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 CDYLQ9Y232 598 aa4.45□□□□□ -1.7
ATM-217ENST00000531957 POLR2AP24928 1970 aaKnown RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 GRM6O15303 877 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 XPOTO43592 962 aaKnown RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA12O60330 932 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 C1RP00736 705 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 MYBL2P10244 700 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 ITGB6P18564 788 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 VAV2P52735 878 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 ZNF280AP59817 542 aaPredicted RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 CTXN1P60606 82 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 IL10RAQ13651 578 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 INAVAQ3KP66 663 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 C3orf36Q3SXR2 165 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 BOLLQ8N9W6 283 aaKnown RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 SSH3Q8TE77 659 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 FUBP1Q96AE4 644 aaKnown RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 CCDC8Q9H0W5 538 aaPredicted RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 KIAA1586Q9HCI6 787 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 TDP1Q9NUW8 608 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 MKS1Q9NXB0 559 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 LRIT1Q9P2V4 623 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 TRHDEQ9UKU6 1024 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 LIMCH1Q9UPQ0 1083 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA9Q9Y5G4 932 aaKnown RBP4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA8Q9Y5G5 932 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA7Q9Y5G6 932 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA6Q9Y5G7 932 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 PCDHGA3Q9Y5H0 932 aa4.44□□□□□ -1.7
ATM-217ENST00000531957 TRGV11A0A075B6L2 103 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 HAUS5O94927 633 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 AGFG2O95081 481 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 CDKN1CP49918 316 aaPredicted RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 ELLP55199 621 aaPredicted RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 MRPS35P82673 323 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 MTMR1Q13613 665 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 FAM50AQ14320 339 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 ZNF169Q14929 603 aaPredicted RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 FLYWCH1Q4VC44 716 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 EPHA10Q5JZY3 1008 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 ARHGEF25Q86VW2 580 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 Q8NA96 180 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 FAM98AQ8NCA5 519 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 NSUN7Q8NE18 718 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 IFI44Q8TCB0 444 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 ACTRT2Q8TDY3 377 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 KAT5Q92993 513 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 TMEM125Q96AQ2 219 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 MTMR8Q96EF0 704 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 FAXDC2Q96IV6 333 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 DUSP26Q9BV47 211 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 PUS7LQ9H0K6 701 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 SPC25Q9HBM1 224 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 SAP30BPQ9UHR5 308 aaKnown RBP4.43□□□□□ -1.7
ATM-217ENST00000531957 SLC45A2Q9UMX9 530 aa4.43□□□□□ -1.7
ATM-217ENST00000531957 HTRA2O43464 458 aaPredicted RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 KATNA1O75449 491 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 CD1AP06126 327 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 EDNRBP24530 442 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 WASP42768 502 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 KIF23Q02241 960 aaPredicted RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 ITKQ08881 620 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 PCBP2Q15366 365 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATM-217ENST00000531957 SF3B3Q15393 1217 aaKnown RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 ATP2B3Q16720 1220 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 UTP14CQ5TAP6 766 aaKnown RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 SYDE2Q5VT97 1194 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 SP5Q6BEB4 398 aaPredicted RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 COLGALT2Q8IYK4 626 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
ATM-217ENST00000531957 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 SLC9A6Q92581 669 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 HDAC10Q969S8 669 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 LRFN3Q9BTN0 628 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 IL17RBQ9NRM6 502 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 KCTD5Q9NXV2 234 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 FOXJ2Q9P0K8 574 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 SERPINB13Q9UIV8 391 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 IPPQ9Y573 584 aa4.42□□□□□ -1.7
ATM-217ENST00000531957 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 MYADML2A6NDP7 307 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 CCDC154A6NI56 674 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 IGSF3O75054 1194 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 RARRES1P49788 294 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 GUCY2FP51841 1108 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 SLC16A1P53985 500 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 EVA1CP58658 441 aa4.41□□□□□ -1.7
ATM-217ENST00000531957 MC2RQ01718 297 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms