RNA–Protein interactions for RNA: ENST00000531849.5

XRRA1-215, Transcript of X-ray radiation resistance associated 1, human

TSL 2

Gene XRRA1, Length 5,084 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRRA1-215	ENST00000531849	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	RGS9BP	Q6ZS82	235 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	APLF	Q8IW19	511 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	ACER1	Q8TDN7	264 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	RNF25	Q96BH1	459 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	XPO6	Q96QU8	1125 aa	Known RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	FBXO28	Q9NVF7	368 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	RBAK	Q9NYW8	714 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	DCTN4	Q9UJW0	460 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	G3BP2	Q9UN86	482 aa	Known RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	RFC5	P40937	340 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	HIF1A	Q16665	826 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	HEATR6	Q6AI08	1181 aa	Known RBP	13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	AFG1L	Q8WV93	481 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	CEP19	Q96LK0	163 aa		13.52	□□□□□ -0.25
XRRA1-215	ENST00000531849	ICAM1	P05362	532 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	BCAR1	P56945	870 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	EARS2	Q5JPH6	523 aa	Known RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	RCOR2	Q8IZ40	523 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	TTC8	Q8TAM2	541 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	ING2	Q9H160	280 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	AAAS	Q9NRG9	546 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849		A8MXQ7	604 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	SPAG6	O75602	509 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	FAM107A	O95990	144 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	STAG3L1	P0CL83	205 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	LSP1	P33241	339 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	HDAC4	P56524	1084 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	YWHAH	Q04917	246 aa	Predicted RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	GPD1L	Q8N335	351 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	CEP70	Q8NHQ1	597 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	TNIP3	Q96KP6	325 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	RIT2	Q99578	217 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	VPS11	Q9H270	941 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	TRABD	Q9H4I3	376 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	RGL1	Q9NZL6	768 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	SUPT20HL2	P0C7V6	817 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	INHBE	P58166	350 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	CDO1	Q16878	200 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	TRPV6	Q9H1D0	765 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	ISCU	Q9H1K1	167 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	SMIM22	K7EJ46	135 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	SNRPF	P62306	86 aa	Known RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	IRX1	P78414	480 aa	Predicted RBP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	HIC1	Q14526	733 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	PKN1	Q16512	942 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	WDR93	Q6P2C0	686 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	MXRA8	Q9BRK3	442 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	EHD4	Q9H223	541 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	JMJD4	Q9H9V9	463 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	APEX2	Q9UBZ4	518 aa		13.51	□□□□□ -0.25
XRRA1-215	ENST00000531849	WNT10B	O00744	389 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	PDHA1	P08559	390 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	BFSP2	Q13515	415 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	RWDD4	Q6NW29	188 aa	Known RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	REXO1L1P	Q8IX06	675 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	FBXL16	Q8N461	479 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	HIPK4	Q8NE63	616 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	THOC1	Q96FV9	657 aa	Known RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	ERGIC2	Q96RQ1	377 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	RANBP17	Q9H2T7	1088 aa	Known RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	WDR35	Q9P2L0	1181 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	EMSY	Q7Z589	1322 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	C3	P01024	1663 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	CFAP69	A5D8W1	941 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	TCP11X1	B4DZS4	312 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	IRAK1	P51617	712 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	PSMC1	P62191	440 aa	Known RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	SMYD3	Q9H7B4	428 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	UBR1	Q8IWV7	1749 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	GOLGA8M	H3BSY2	632 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	PDHX	O00330	501 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	PIK3R2	O00459	728 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	PGM1	P36871	562 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	CORO7	P57737	925 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	TRADD	Q15628	312 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	MTHFD1L	Q6UB35	978 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	GPRASP2	Q96D09	838 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	IL17RA	Q96F46	866 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	SLC4A9	Q96Q91	983 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	MKNK1	Q9BUB5	465 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	ARHGAP26	Q9UNA1	814 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	FAM205A	Q6ZU69	1335 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	ITGA4	P13612	1032 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	CHN1	P15882	459 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	ZMAT2	Q96NC0	199 aa	Known RBP	13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	TRIM62	Q9BVG3	475 aa		13.5	□□□□□ -0.25
XRRA1-215	ENST00000531849	RNF103-CHMP3	A0A140T963	221 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	SLC4A1	P02730	911 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	SERPINB9	P50453	376 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	LRRC14	Q15048	493 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	DEFB115	Q30KQ5	88 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	VGLL2	Q8N8G2	317 aa		13.49	□□□□□ -0.25
XRRA1-215	ENST00000531849	TMEM143	Q96AN5	459 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms