RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 TMEM200CA6NKL6 621 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 H3BML4 177 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 TCEA3O75764 348 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 LY86O95711 162 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 MYL3P08590 195 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 ZNF37AP17032 561 aaPredicted RBP5.46□□□□□ -1.54
USP47-211ENST00000531513 ALDH5A1P51649 535 aaPredicted RBP5.46□□□□□ -1.54
USP47-211ENST00000531513 TAP1Q03518 808 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 MRPL49Q13405 166 aaKnown RBP5.46□□□□□ -1.54
USP47-211ENST00000531513 MUM1Q2TAK8 710 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 CCDC178Q5BJE1 867 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 ZKSCAN2Q63HK3 967 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 SRLQ86TD4 932 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 FAM186BQ8IYM0 893 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 PPM1NQ8N819 430 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 FAM156AQ8NDB6 213 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 SUPT20HQ8NEM7 779 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 PPP1R35Q8TAP8 253 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 PNISRQ8TF01 805 aaKnown RBP5.46□□□□□ -1.54
USP47-211ENST00000531513 AUTS2Q8WXX7 1259 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 MAF1Q9H063 256 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 TMEM60Q9H2L4 133 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 R3HDMLQ9H3Y0 253 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 AKIP1Q9NQ31 210 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 HDAC5Q9UQL6 1122 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 NUMBLQ9Y6R0 609 aa5.46□□□□□ -1.54
USP47-211ENST00000531513 ST20-MTHFSA0A0A6YYL1 179 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 LEFTY2O00292 366 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 RNASET2O00584 256 aaKnown RBP5.45□□□□□ -1.54
USP47-211ENST00000531513 LPLP06858 475 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 TYRP1P17643 537 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 GPR15P49685 360 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 GZMKP49863 264 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 FXR1P51114 621 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP47-211ENST00000531513 FAM193AP78312 1265 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 RAPGEF1Q13905 1077 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 TMEM95Q3KNT9 176 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 CCDC149Q6ZUS6 474 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 XYLT1Q86Y38 959 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 DENND1CQ8IV53 801 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 SLC41A1Q8IVJ1 513 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 ARHGEF19Q8IW93 802 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 CAMKK1Q8N5S9 505 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 MSL3Q8N5Y2 521 aaKnown RBP5.45□□□□□ -1.54
USP47-211ENST00000531513 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP47-211ENST00000531513 FERMT2Q96AC1 680 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 GNL3LQ9NVN8 582 aaKnown RBP5.45□□□□□ -1.54
USP47-211ENST00000531513 SYBUQ9NX95 663 aa5.45□□□□□ -1.54
USP47-211ENST00000531513 FAM227AF5H4B4 570 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 PQBP1O60828 265 aaKnown RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 SETSIPP0DME0 302 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 ZKSCAN1P17029 563 aaPredicted RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 SLC16A1P53985 500 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 ATXN1P54253 815 aaKnown RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 DUSP2Q05923 314 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 CHAF1AQ13111 956 aaPredicted RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 SEMA5AQ13591 1074 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 KRT72Q14CN4 511 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 KIAA0753Q2KHM9 967 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 C1orf228Q6PIY5 440 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 TAS1R1Q7RTX1 841 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 RD3Q7Z3Z2 195 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 KIAA0319LQ8IZA0 1049 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 LCORLQ8N3X6 602 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 ACRBPQ8NEB7 543 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 MYRIPQ8NFW9 859 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 GAB3Q8WWW8 586 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 NAF1Q96HR8 494 aaKnown RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 DCLRE1CQ96SD1 692 aaKnown RBP5.44□□□□□ -1.54
USP47-211ENST00000531513 TEX101Q9BY14 249 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 KCTD10Q9H3F6 313 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 PRDM12Q9H4Q4 367 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 DMTF1Q9Y222 760 aa5.44□□□□□ -1.54
USP47-211ENST00000531513 ABHD14A-ACY1A0A1B0GW23 586 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 A0A1W2PR48 441 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 DTNBO60941 627 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 UBXN7O94888 489 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 NDUFA10O95299 355 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 CD38P28907 300 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 TRAPPC10P48553 1259 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 LGALS4P56470 323 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 RNASE9P60153 205 aaKnown RBP5.43□□□□□ -1.54
USP47-211ENST00000531513 LONRF1Q17RB8 773 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 ANO4Q32M45 955 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 PGS1Q32NB8 556 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 SYT12Q8IV01 421 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 TSPEARQ8WU66 669 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 RSAD2Q8WXG1 361 aa5.43□□□□□ -1.54
USP47-211ENST00000531513 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.43□□□□□ -1.54
USP47-211ENST00000531513 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms