RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SAMM50Q9Y512 469 aa7.84□□□□□ -1.16
TRIM53CP-201ENST00000531490 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 A0A1W2PP55 124 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 METTL12A8MUP2 240 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 PI15O43692 258 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 GAS7O60861 476 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 KRT37O76014 449 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 STBD1O95210 358 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 FGFR1P11362 822 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 PAK2Q13177 524 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 TRIM29Q14134 588 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 MIS18BP1Q6P0N0 1132 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 MTHFD1LQ6UB35 978 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 MOXD1Q6UVY6 613 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 Q6ZS46 218 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 CKAP2LQ8IYA6 745 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 THNSL1Q8IYQ7 743 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 C12orf76Q8N812 135 aaPredicted RBP7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 FAM184AQ8NB25 1140 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 FLCNQ8NFG4 579 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 SLC7A3Q8WY07 619 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 RMDN1Q96DB5 314 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 TEKT3Q9BXF9 490 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 TMEM60Q9H2L4 133 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 POMKQ9H5K3 350 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 KCNMB3Q9NPA1 279 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 OSGEPQ9NPF4 335 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 TYW1Q9NV66 732 aaKnown RBP7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 GINS2Q9Y248 185 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
TRIM53CP-201ENST00000531490 ATG2AQ2TAZ0 1938 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 KMT2EQ8IZD2 1858 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 A0A087WWV3 80 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 HBP1O60381 514 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 CPNE3O75131 537 aaKnown RBP7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 STAG3L1P0CL83 205 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 GJB2P29033 226 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 HMGN5P82970 282 aaKnown RBP7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 ZNF174Q15697 407 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 FAM160B1Q5W0V3 765 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 ACAD11Q709F0 780 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 MIER3Q7Z3K6 550 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 SMAP1Q8IYB5 467 aaPredicted RBP7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 KIAA0319LQ8IZA0 1049 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 COLGALT1Q8NBJ5 622 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 FAM20AQ96MK3 541 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 PPP1R16BQ96T49 567 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 TCF25Q9BQ70 676 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 ENTPD7Q9NQZ7 604 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 WRAP73Q9P2S5 460 aaPredicted RBP7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 VAV3Q9UKW4 847 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 SORCS3Q9UPU3 1222 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 NOC2LQ9Y3T9 749 aaKnown RBP7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 PCDHA2Q9Y5H9 948 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 TRPV2Q9Y5S1 764 aa7.82□□□□□ -1.16
TRIM53CP-201ENST00000531490 CHD8Q9HCK8 2581 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 PLXNA3P51805 1871 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 WDR64B1ANS9 1081 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 EIF1AYO14602 144 aaKnown RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 MCM7P33993 719 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 TXKP42681 527 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 SARSP49591 514 aaKnown RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 SLC26A2P50443 739 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 TOB1P50616 345 aaPredicted RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 UBE3AQ05086 875 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 SPIRE1Q08AE8 756 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 PPP2R5CQ13362 524 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 DUOXA2Q1HG44 320 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CWF19L1Q69YN2 538 aaKnown RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 TMEM184AQ6ZMB5 413 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 LRRC55Q6ZSA7 311 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 ZNF668Q96K58 619 aaPredicted RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 MTMR9Q96QG7 549 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CEP89Q96ST8 783 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 TCF12Q99081 682 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CDCA3Q99618 268 aaPredicted RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 ADAM2Q99965 735 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 FTHL17Q9BXU8 183 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CELF4Q9BZC1 486 aaKnown RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 FOXP1Q9H334 677 aaPredicted RBP7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 MFSD1Q9H3U5 465 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CWH43Q9H720 699 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 BRMS1Q9HCU9 246 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 RGL1Q9NZL6 768 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 PCDHB7Q9Y5E2 793 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 IGSF9BQ9UPX0 1349 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 TTC3P53804 2025 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 CHD6Q8TD26 2715 aa7.81□□□□□ -1.16
TRIM53CP-201ENST00000531490 SMIM35A0A1B0GVV1 85 aa7.8□□□□□ -1.16
TRIM53CP-201ENST00000531490 TBX3O15119 743 aa7.8□□□□□ -1.16
TRIM53CP-201ENST00000531490 MARCH6O60337 910 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms