RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZBTB41Q5SVQ8 909 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 DTHD1Q6ZMT9 781 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 HS6ST3Q8IZP7 471 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 SUMF1Q8NBK3 374 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 RUBCNQ92622 972 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 SUSD3Q96L08 255 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 TBC1D32Q96NH3 1257 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 OSBPL6Q9BZF3 934 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 SHISA7A6NL88 538 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 KINO60870 393 aaKnown RBP20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 SPAG1Q07617 926 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 NOLC1Q14978 699 aaKnown RBP eCLIP20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 SLC10A6Q3KNW5 377 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF528Q3MIS6 628 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 FAM78AQ5JUQ0 283 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 ELSPBP1Q96BH3 223 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 PLIN2Q99541 437 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 C17orf75Q9HAS0 396 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 FBXO4Q9UKT5 387 aa20.13■□□□□ 0.81
SSSCA1-206ENST00000531405 NUP210Q8TEM1 1887 aaPredicted RBP20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 LAD1O00515 517 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 GUCY2CP25092 1073 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 PRPHP41219 470 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 ADCY1Q08828 1119 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 STRN3Q13033 797 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF280DQ6N043 979 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 TSSK4Q6SA08 328 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 PDZD4Q76G19 769 aaPredicted RBP20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 TMEM161BQ8NDZ6 487 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 DDX12PQ92771 950 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 CLDN23Q96B33 292 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 ZSWIM3Q96MP5 696 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 PNMA5Q96PV4 448 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 HAPLN2Q9GZV7 340 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 CEP72Q9P209 647 aa20.12■□□□□ 0.81
SSSCA1-206ENST00000531405 SCN1AP35498 2009 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 NPHP3-ACAD11A0A0J9YXS1 232 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 TOM1L1O75674 476 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 CXCL8P10145 99 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 MAPTP10636 758 aaKnown RBP20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 PLS3P13797 630 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 GJA1P17302 382 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 TWF1Q12792 350 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 TPGS2Q68CL5 300 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 MCTP1Q6DN14 999 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF852Q6ZMS4 543 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 RNF19BQ6ZMZ0 732 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 SPIRE2Q8WWL2 714 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 ASB16Q96NS5 453 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 NTPCRQ9BSD7 190 aaKnown RBP20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 BRD9Q9H8M2 597 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 ZFP14Q9HCL3 533 aa20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 NDRG2Q9UN36 371 aaKnown RBP20.11■□□□□ 0.81
SSSCA1-206ENST00000531405 RALGAPA1Q6GYQ0 2036 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 NCOR2Q9Y618 2525 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF197O14709 1029 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 MOSPD3O75425 235 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 CPB1P15086 417 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 MAGEA9P43362 315 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 FZD5Q13467 585 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 CYP4A22Q5TCH4 519 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 ELMOD1Q8N336 334 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 APPL2Q8NEU8 664 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 TIPINQ9BVW5 301 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 AFF4Q9UHB7 1163 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 PCDHB8Q9UN66 801 aa20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 TIMM13Q9Y5L4 95 aaPredicted RBP20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF638Q14966 1978 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-206ENST00000531405 NCANO14594 1321 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 MYL4P12829 197 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 TNFSF9P41273 254 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 VIPR2P41587 438 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 HYIQ5T013 277 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 IQCEQ6IPM2 695 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 VITQ6UXI7 678 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 SYT2Q8N9I0 419 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 ATRIPQ8WXE1 791 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 DNASE1L2Q92874 299 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF512Q96ME7 567 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 NELL2Q99435 816 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 TRMT61BQ9BVS5 477 aaKnown RBP20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 DENND4CQ5VZ89 1909 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 SPTBN2O15020 2390 aa20.09■□□□□ 0.81
SSSCA1-206ENST00000531405 MED19A0JLT2 244 aaPredicted RBP20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 VWA3AA6NCI4 1184 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 SPTLC1O15269 473 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 NCAM2O15394 837 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 CLDN3O15551 220 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 MICAL2O94851 1124 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 VNN2O95498 520 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 OR4Q2P0C623 313 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 GDI1P31150 447 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 RPS9P46781 194 aaKnown RBP20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 GUCY2FP51841 1108 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms