RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SPDYE7PQ495Y7 208 aa4□□□□□ -1.77
NUP98-218ENST00000530516 BRDTQ58F21 947 aaPredicted RBP4□□□□□ -1.77
NUP98-218ENST00000530516 DACT2Q5SW24 774 aa4□□□□□ -1.77
NUP98-218ENST00000530516 MICALCLQ6ZW33 695 aa4□□□□□ -1.77
NUP98-218ENST00000530516 BOLLQ8N9W6 283 aaKnown RBP4□□□□□ -1.77
NUP98-218ENST00000530516 KAT5Q92993 513 aa4□□□□□ -1.77
NUP98-218ENST00000530516 MRGPRX4Q96LA9 322 aa4□□□□□ -1.77
NUP98-218ENST00000530516 SMAD5Q99717 465 aaKnown RBP4□□□□□ -1.77
NUP98-218ENST00000530516 USP25Q9UHP3 1055 aa4□□□□□ -1.77
NUP98-218ENST00000530516 TLK1Q9UKI8 766 aa4□□□□□ -1.77
NUP98-218ENST00000530516 PCDHB1Q9Y5F3 818 aa4□□□□□ -1.77
NUP98-218ENST00000530516 POLR2AP24928 1970 aaKnown RBP4□□□□□ -1.77
NUP98-218ENST00000530516 COL11A2P13942 1736 aaPredicted RBP3.99□□□□□ -1.77
NUP98-218ENST00000530516 A0A1B0GTW7 788 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 TEX33O43247 280 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 CDKL5O76039 1030 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 ZFPL1O95159 310 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 ERBB2P04626 1255 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 FGFR4P22455 802 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 FDXRP22570 491 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 NOMO3P69849 1222 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 CDC42EP1Q00587 391 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 KIF23Q02241 960 aaPredicted RBP3.99□□□□□ -1.77
NUP98-218ENST00000530516 SLFN5Q08AF3 891 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 FOXI1Q12951 378 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 RESTQ13127 1097 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 TP53BP2Q13625 1128 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 NOMO2Q5JPE7 1267 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 TSHZ3Q63HK5 1081 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 MIGA2Q7L4E1 593 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 GLCCI1Q86VQ1 547 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 MAPKAPK5Q8IW41 473 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 FAM98AQ8NCA5 519 aaKnown RBP3.99□□□□□ -1.77
NUP98-218ENST00000530516 ASB10Q8WXI3 467 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 HDAC10Q969S8 669 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 TMX3Q96JJ7 454 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 BRINP2Q9C0B6 783 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 REXO4Q9GZR2 422 aaKnown RBP3.99□□□□□ -1.77
NUP98-218ENST00000530516 PRDM13Q9H4Q3 707 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 TDP1Q9NUW8 608 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 HSFX1Q9UBD0 423 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 ATP11BQ9Y2G3 1177 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 AATKQ6ZMQ8 1374 aa3.99□□□□□ -1.77
NUP98-218ENST00000530516 CDHR4A6H8M9 788 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 SGTAO43765 313 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 PROP1O75360 226 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 SLC16A1P53985 500 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 ADKP55263 362 aaKnown RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 ZNF280AP59817 542 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 DSC2Q02487 901 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 FLYWCH1Q4VC44 716 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 EPHA10Q5JZY3 1008 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 PAPD7Q5XG87 772 aaKnown RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 FAM177A1Q8N128 213 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 TMEM132CQ8N3T6 1108 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 NSUN6Q8TEA1 469 aaKnown RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 FUBP1Q96AE4 644 aaKnown RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 NACC2Q96BF6 587 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 LRFN3Q9BTN0 628 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 C11orf54Q9H0W9 315 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 GSTO2Q9H4Y5 243 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 VSX1Q9NZR4 365 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 SAP30BPQ9UHR5 308 aaKnown RBP3.98□□□□□ -1.77
NUP98-218ENST00000530516 MRFAP1Q9Y605 127 aa3.98□□□□□ -1.77
NUP98-218ENST00000530516 ANKRD62A6NC57 917 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 PROB1E7EW31 1015 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 KIAA0391O15091 583 aaKnown RBP3.97□□□□□ -1.77
NUP98-218ENST00000530516 GRM6O15303 877 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 ITGAMP11215 1152 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 CKBP12277 381 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 FCER1AP12319 257 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 MPLP40238 635 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 FXR1P51114 621 aaKnown RBP eCLIP3.97□□□□□ -1.77
NUP98-218ENST00000530516 HSD11B2P80365 405 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 TLE1Q04724 770 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 EFCAB2Q5VUJ9 269 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 PNMA8AQ86V59 439 aaPredicted RBP3.97□□□□□ -1.77
NUP98-218ENST00000530516 FAM43AQ8N2R8 423 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 Q8NA96 180 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 ZCRB1Q8TBF4 217 aaKnown RBP3.97□□□□□ -1.77
NUP98-218ENST00000530516 STAG1Q8WVM7 1258 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 MARS2Q96GW9 593 aaKnown RBP3.97□□□□□ -1.77
NUP98-218ENST00000530516 RNPEPQ9H4A4 650 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 KMT5AQ9NQR1 393 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 HOMER2Q9NSB8 354 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 FRMD4BQ9Y2L6 1034 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 NOP58Q9Y2X3 529 aaKnown RBP3.97□□□□□ -1.77
NUP98-218ENST00000530516 NOX1Q9Y5S8 564 aa3.97□□□□□ -1.77
NUP98-218ENST00000530516 LRRC14BA6NHZ5 514 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 ALAS1P13196 640 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 CXADRP78310 365 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 UAP1L1Q3KQV9 507 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 ZNF362Q5T0B9 420 aaPredicted RBP3.96□□□□□ -1.78
NUP98-218ENST00000530516 GPR149Q86SP6 731 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 RSPH3Q86UC2 560 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 IL17RDQ8NFM7 739 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 CLPTM1LQ96KA5 538 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 TLR10Q9BXR5 811 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms