RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 CYP4A22Q5TCH4 519 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 RINT1Q6NUQ1 792 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 C1orf186Q6ZWK4 172 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-219ENST00000530495 DRC1Q96MC2 740 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 ASB16Q96NS5 453 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 TRMT61BQ9BVS5 477 aaKnown RBP16.33■□□□□ 0.2
CAPN1-219ENST00000530495 FAM126AQ9BYI3 521 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-219ENST00000530495 BRD9Q9H8M2 597 aa16.33■□□□□ 0.2
CAPN1-219ENST00000530495 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.2
CAPN1-219ENST00000530495 NRG2O14511 850 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 SDHBP21912 280 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 HMGN5P82970 282 aaKnown RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 MTAPQ13126 283 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 SLC10A6Q3KNW5 377 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 TSSK4Q6SA08 328 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 PDZD4Q76G19 769 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 ELMOD1Q8N336 334 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 DDX12PQ92771 950 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 SMARCD2Q92925 531 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 IRF7Q92985 503 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 ZBTB45Q96K62 511 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 ZNF512Q96ME7 567 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 ZSWIM3Q96MP5 696 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 TBC1D32Q96NH3 1257 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 CEP72Q9P209 647 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 AFF4Q9UHB7 1163 aaKnown RBP16.32■□□□□ 0.2
CAPN1-219ENST00000530495 KCNG1Q9UIX4 513 aa16.32■□□□□ 0.2
CAPN1-219ENST00000530495 LAD1O00515 517 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 SLC16A4O15374 487 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 MOSPD3O75425 235 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 PSMC3P17980 439 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 MCM4P33991 863 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 EPHA5P54756 1037 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 GRM2Q14416 872 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 IL17AQ16552 155 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 VITQ6UXI7 678 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 HS6ST3Q8IZP7 471 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 LEMD2Q8NC56 503 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
CAPN1-219ENST00000530495 TIPINQ9BVW5 301 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 TRPV4Q9HBA0 871 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 ZNF334Q9HCZ1 680 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-219ENST00000530495 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 COL4A2P08572 1712 aa16.31■□□□□ 0.2
CAPN1-219ENST00000530495 TICRRQ7Z2Z1 1910 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 TOM1L1O75674 476 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 SEC24BO95487 1268 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 TDGF1P13385 188 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 GUCY2CP25092 1073 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 CDC25AP30304 524 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 PRPHP41219 470 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 NRLP54845 237 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 TWF1Q12792 350 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 ZNF280DQ6N043 979 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 RNF19BQ6ZMZ0 732 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 FAM3CQ92520 227 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-219ENST00000530495 IER2Q9BTL4 223 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
CAPN1-219ENST00000530495 PLEKHA5Q9HAU0 1116 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 NDRG2Q9UN36 371 aaKnown RBP16.3■□□□□ 0.2
CAPN1-219ENST00000530495 PCDHB8Q9UN66 801 aa16.3■□□□□ 0.2
CAPN1-219ENST00000530495 SMG5Q9UPR3 1016 aaKnown RBP16.3■□□□□ 0.2
CAPN1-219ENST00000530495 MYH11P35749 1972 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 M0QZQ0 153 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 OAZ2O95190 189 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 TGM1P22735 817 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-219ENST00000530495 GDI1P31150 447 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 VIPR2P41587 438 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-219ENST00000530495 STRN3Q13033 797 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 ZPBP2Q6X784 338 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 MFSD6LQ8IWD5 586 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 TMEM161BQ8NDZ6 487 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 BEST2Q8NFU1 509 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-219ENST00000530495 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
CAPN1-219ENST00000530495 OXCT2Q9BYC2 517 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-219ENST00000530495 GPR88Q9GZN0 384 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms