RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PDSS2Q86YH6 399 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 KRT78Q8N1N4 520 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 ZNF808Q8N4W9 903 aaPredicted RBP7.44□□□□□ -1.22
CASP4-208ENST00000530309 FITM2Q8N6M3 262 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 CELF5Q8N6W0 485 aaKnown RBP7.44□□□□□ -1.22
CASP4-208ENST00000530309 APIPQ96GX9 242 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 WWC2-AS2Q96NR7 200 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 NUP62CLQ9H1M0 184 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 JAG2Q9Y219 1238 aa7.44□□□□□ -1.22
CASP4-208ENST00000530309 CDHR4A6H8M9 788 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 ANXA1P04083 346 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 MYF5P13349 255 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 NPR1P16066 1061 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 SLC6A2P23975 617 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 NEK3P51956 506 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 CHN2P52757 468 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 SOX8P57073 446 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 EXOSC9Q06265 439 aaKnown RBP7.43□□□□□ -1.22
CASP4-208ENST00000530309 UTP14CQ5TAP6 766 aaKnown RBP7.43□□□□□ -1.22
CASP4-208ENST00000530309 NAIF1Q69YI7 327 aaPredicted RBP7.43□□□□□ -1.22
CASP4-208ENST00000530309 HTR3DQ70Z44 454 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 EDAQ92838 391 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 MNTQ99583 582 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 BDH2Q9BUT1 245 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 NAA15Q9BXJ9 866 aaKnown RBP7.43□□□□□ -1.22
CASP4-208ENST00000530309 LRRC27Q9C0I9 530 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 CD248Q9HCU0 757 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.43□□□□□ -1.22
CASP4-208ENST00000530309 SLC45A2Q9UMX9 530 aa7.43□□□□□ -1.22
CASP4-208ENST00000530309 GOLGA6L6A8MZA4 724 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 MYO1FO00160 1098 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 ITGB1P05556 798 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 RARBP10826 455 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 HDCP19113 662 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 SLC7A1P30825 629 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 HIBADHP31937 336 aaKnown RBP7.42□□□□□ -1.22
CASP4-208ENST00000530309 PHKA1P46020 1223 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 RHBDL3P58872 404 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 NOMO3P69849 1222 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 SYT12Q8IV01 421 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 PHACTR3Q96KR7 559 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 C20orf173Q96LM9 149 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 APOL5Q9BWW9 433 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 GPR87Q9BY21 358 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.42□□□□□ -1.22
CASP4-208ENST00000530309 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
CASP4-208ENST00000530309 KLRG2A4D1S0 409 aaPredicted RBP7.41□□□□□ -1.22
CASP4-208ENST00000530309 ISM1B1AKI9 464 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 AGFG2O95081 481 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 KCNJ5P48544 419 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 MAN2A2P49641 1150 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 Q6ZRM9 215 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 ZFPM1Q8IX07 1006 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 CXorf38Q8TB03 319 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 TBC1D15Q8TC07 691 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 KBTBD7Q8WVZ9 684 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 PGBD4Q96DM1 585 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 LOXL4Q96JB6 756 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 DEF6Q9H4E7 631 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 CNOT11Q9UKZ1 510 aaKnown RBP7.41□□□□□ -1.22
CASP4-208ENST00000530309 USP19O94966 1318 aa7.41□□□□□ -1.22
CASP4-208ENST00000530309 TBX3O15119 743 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 GNAI2P04899 355 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 IFIT2P09913 472 aaKnown RBP7.4□□□□□ -1.22
CASP4-208ENST00000530309 RPL17P18621 184 aaKnown RBP7.4□□□□□ -1.22
CASP4-208ENST00000530309 EN2P19622 333 aaPredicted RBP7.4□□□□□ -1.22
CASP4-208ENST00000530309 SCNN1GP51170 649 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 ARFIP2P53365 341 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 NHLH2Q02577 135 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 HABP2Q14520 560 aaPredicted RBP7.4□□□□□ -1.22
CASP4-208ENST00000530309 CNGA2Q16280 664 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 ERICH6BQ5W0A0 696 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 SAMD3Q8N6K7 520 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 SCAMP4Q969E2 229 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 SLC39A13Q96H72 371 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 SUCLG2Q96I99 432 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 ADOQ96SZ5 270 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
CASP4-208ENST00000530309 TRIM54Q9BYV2 358 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 BTBD1Q9H0C5 482 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 GPR35Q9HC97 309 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 MED16Q9Y2X0 877 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
CASP4-208ENST00000530309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
CASP4-208ENST00000530309 XDHP47989 1333 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 ZNF785A8K8V0 405 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 K7ESM1 405 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 LEFTY2O00292 366 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 PEX14O75381 377 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 PRSS23O95084 383 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 CKBP12277 381 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 PSMC1P62191 440 aaKnown RBP7.39□□□□□ -1.23
CASP4-208ENST00000530309 FMO1Q01740 532 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 PLP2Q04941 152 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 CNGB1Q14028 1251 aaPredicted RBP7.39□□□□□ -1.23
CASP4-208ENST00000530309 BRD3Q15059 726 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 METRNLQ641Q3 311 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 TMIEQ8NEW7 156 aa7.39□□□□□ -1.23
CASP4-208ENST00000530309 NUP133Q8WUM0 1156 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms