RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PIRO00625 290 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 MBTPS2O43462 519 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 C1RP00736 705 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 ADH1AP07327 375 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 EPCAMP16422 314 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 TKTP29401 623 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 CLUL1Q15846 466 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 PDXDC1Q6P996 788 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 GOLGA5Q8TBA6 731 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 NOC3LQ8WTT2 800 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 TMEM174Q8WUU8 243 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 CLSTN3Q9BQT9 956 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 DMAC2Q9NW81 257 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 DPP3Q9NY33 737 aa13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 HOOK1Q9UJC3 728 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 PDXKO00764 312 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 PPEF2O14830 753 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SYN3O14994 580 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 KIF20AO95235 890 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 MCM4P33991 863 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 CYP2J2P51589 502 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 UBE2HP62256 183 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SMAD4Q13485 552 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SURF1Q15526 300 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 PSMD5Q16401 504 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 LILRA6Q6PI73 481 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 ANKS3Q6ZW76 656 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SLC9A9Q8IVB4 645 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 RDH13Q8NBN7 331 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 SMRP1Q8NCR6 262 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 GSDMAQ96QA5 445 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 DZANK1Q9NVP4 752 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 RMND1Q9NWS8 449 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
CCDC90B-216ENST00000529856 M0QZQ0 153 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 KINO60870 393 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 SMC2O95347 1197 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 GLUD1P00367 558 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 IL9P15248 144 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 PAX3P23760 479 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 LILRA4P59901 499 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 MRPL58Q14197 206 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 PALB2Q86YC2 1186 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 GUF1Q8N442 669 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 ADAMTS19Q8TE59 1207 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 SMARCE1Q969G3 411 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 MTRRQ9UBK8 725 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 MAPK8IP1Q9UQF2 711 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 TRAF3IP3Q9Y228 551 aa13.71□□□□□ -0.21
CCDC90B-216ENST00000529856 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 SCN1AP35498 2009 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 SPTLC1O15269 473 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 ADAM12O43184 909 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 TGM5O43548 720 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 CALUO43852 315 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 TBC1D4O60343 1298 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 EXOC3O60645 756 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 CYP24A1Q07973 514 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 RAB33AQ14088 237 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 PSMD6Q15008 389 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF658Q5TYW1 1059 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 DSTYKQ6XUX3 929 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 C12orf76Q8N812 135 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 C1orf127Q8N9H9 656 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 SUSD6Q92537 303 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 ADAM7Q9H2U9 754 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 INTS13Q9NVM9 706 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 USP15Q9Y4E8 981 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-216ENST00000529856 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms