RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 UBXN2BQ14CS0 331 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 ATP2B3Q16720 1220 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
NUP98-216ENST00000529379 CCDC157Q569K6 752 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 SH2D3CQ8N5H7 860 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 IL17RDQ8NFM7 739 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 KLHDC4Q8TBB5 520 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
NUP98-216ENST00000529379 PRKRIP1Q9H875 184 aaPredicted RBP6.31□□□□□ -1.4
NUP98-216ENST00000529379 MAN1C1Q9NR34 630 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 CNTLNQ9NXG0 1405 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 LAMC3Q9Y6N6 1575 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 CCDC7Q96M83 1385 aa6.31□□□□□ -1.4
NUP98-216ENST00000529379 UGGT2Q9NYU1 1516 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 ZBED9Q6R2W3 1325 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 GOLGA6L6A8MZA4 724 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 LEFTY2O00292 366 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 PRRG2O14669 202 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 PLSCR1O15162 318 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 MTHFD1P11586 935 aaKnown RBP6.3□□□□□ -1.4
NUP98-216ENST00000529379 SLC6A2P23975 617 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 ACRV1P26436 265 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 PRDX5P30044 214 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 CHN2P52757 468 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 CRHR2Q13324 411 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 GBX1Q14549 363 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 PLS1Q14651 629 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 MED25Q71SY5 747 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 COL23A1Q86Y22 540 aaPredicted RBP6.3□□□□□ -1.4
NUP98-216ENST00000529379 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 C1orf43Q9BWL3 253 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 GSTO2Q9H4Y5 243 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 PNPOQ9NVS9 261 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 TESMINQ9Y4I5 508 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 SAMD9Q5K651 1589 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 SUPT6HQ7KZ85 1726 aaKnown RBP6.3□□□□□ -1.4
NUP98-216ENST00000529379 ARHGEF11O15085 1522 aa6.3□□□□□ -1.4
NUP98-216ENST00000529379 GRXCR1A8MXD5 290 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 H3BUI4 141 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 PRSS23O95084 383 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 MGAT1P26572 445 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 SMARCA1P28370 1054 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
NUP98-216ENST00000529379 BUD31P41223 144 aaPredicted RBP6.29□□□□□ -1.4
NUP98-216ENST00000529379 IL12RB1P42701 662 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 CNGB1Q14028 1251 aaPredicted RBP6.29□□□□□ -1.4
NUP98-216ENST00000529379 GALEQ14376 348 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 LLGL1Q15334 1064 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 SPATS1Q496A3 300 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 FAM90A1Q86YD7 464 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 TIFAQ96CG3 184 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 SLC35A4Q96G79 324 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 FAM167AQ96KS9 214 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 NEU1Q99519 415 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 B3GNT5Q9BYG0 378 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 WDCPQ9H6R7 721 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 PRDM11Q9NQV5 511 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 FEZ2Q9UHY8 353 aaPredicted RBP6.29□□□□□ -1.4
NUP98-216ENST00000529379 ANKRD30BQ9BXX2 1392 aa6.29□□□□□ -1.4
NUP98-216ENST00000529379 FRMPD2Q68DX3 1309 aaPredicted RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 NCOA1Q15788 1441 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 A0A088AWK7 358 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 B8ZZF3 427 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 SLC43A1O75387 559 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 ITGB1P05556 798 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 FTH1P19P0C7X4 201 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 ALAS1P13196 640 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 AGFG1P52594 562 aaKnown RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 RAB1AP62820 205 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 NHLH2Q02577 135 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 SPDYAQ5MJ70 313 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 DGKHQ86XP1 1220 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 TMPRSS6Q8IU80 811 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 NLGN4YQ8NFZ3 816 aaPredicted RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 EXTL1Q92935 676 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 CDK5RAP1Q96SZ6 601 aaKnown RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 TMEM60Q9H2L4 133 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 MRPL46Q9H2W6 279 aaKnown RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 SIDT1Q9NXL6 827 aaKnown RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 SLC45A2Q9UMX9 530 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 TSC22D4Q9Y3Q8 395 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 PCDHA1Q9Y5I3 950 aa6.28□□□□□ -1.4
NUP98-216ENST00000529379 URB2Q14146 1524 aaKnown RBP6.28□□□□□ -1.4
NUP98-216ENST00000529379 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
NUP98-216ENST00000529379 KIF3BO15066 747 aa6.27□□□□□ -1.41
NUP98-216ENST00000529379 HAUS5O94927 633 aa6.27□□□□□ -1.41
NUP98-216ENST00000529379 USP14P54578 494 aa6.27□□□□□ -1.41
NUP98-216ENST00000529379 ANO6Q4KMQ2 910 aa6.27□□□□□ -1.41
NUP98-216ENST00000529379 USP39Q53GS9 565 aaKnown RBP6.27□□□□□ -1.41
NUP98-216ENST00000529379 CCDC93Q567U6 631 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms