RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 EPHB4P54760 987 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 MFAP3P55082 362 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 BCAR1P56945 870 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 UBASH3AP57075 661 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 PLCB3Q01970 1234 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 SMARCB1Q12824 385 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 MAPRE1Q15691 268 aaKnown RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 SEZ6Q53EL9 994 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 C9orf57Q5W0N0 161 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 KIAA1841Q6NSI8 718 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 KCNT2Q6UVM3 1135 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 DSTYKQ6XUX3 929 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 SV2AQ7L0J3 742 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 LUZP1Q86V48 1076 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 COLGALT2Q8IYK4 626 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 THEM5Q8N1Q8 247 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 TOP6BLQ8N6T0 577 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 FBXO22Q8NEZ5 403 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 NT5C1BQ96P26 610 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 MTMR12Q9C0I1 747 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 CYP3A43Q9HB55 503 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 SAMSN1Q9NSI8 373 aaKnown RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 ADAM28Q9UKQ2 775 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 USP20Q9Y2K6 914 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 COQ4Q9Y3A0 265 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 MKI67P46013 3256 aaKnown RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 A0A1W2PQC6 194 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 ANO9A1A5B4 782 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 KPNA7A9QM74 516 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 C4BPAP04003 597 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 ITGB3P05106 788 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 SRGAP2BP0DMP2 458 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 TYMPP19971 482 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 PCSK1P29120 753 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 CTNNB1P35222 781 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GCLMP48507 274 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 COPB1P53618 953 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 UBXN1Q04323 297 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 NCAPHQ15003 741 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 KRT31Q15323 416 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 TSR1Q2NL82 804 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 USP41Q3LFD5 358 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 PAN2Q504Q3 1202 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GLRA4Q5JXX5 417 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 ZBTB41Q5SVQ8 909 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 SARM1Q6SZW1 724 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 C15orf39Q6ZRI6 1047 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 DDX53Q86TM3 631 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 TMEM192Q8IY95 271 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 COLGALT1Q8NBJ5 622 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 TIFAQ96CG3 184 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 VWCEQ96DN2 955 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 HPDLQ96IR7 371 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 TNIP3Q96KP6 325 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 OSBPL7Q9BZF2 842 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 EDEM3Q9BZQ6 932 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 NRDE2Q9H7Z3 1164 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 NGRNQ9NPE2 291 aaKnown RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GDAP2Q9NXN4 497 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 LMCD1Q9NZU5 365 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 CXXC1Q9P0U4 656 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GCNT4Q9P109 453 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 FBXL5Q9UKA1 691 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 MAFFQ9ULX9 164 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 AGAP1Q9UPQ3 857 aa8.52□□□□□ -1.05
SSBP3-211ENST00000528787 GBF1Q92538 1859 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 PTPRSQ13332 1948 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 NRP1O14786 923 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 NCK2O43639 380 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 NRDCO43847 1150 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 HLA-DRAP01903 254 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 URODP06132 367 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 GALTP07902 379 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 TRIM49P0CI25 452 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 TRIM49CP0CI26 452 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 POLR2BP30876 1174 aaKnown RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 CLCNKBP51801 687 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 BPIFB4P59827 614 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 LILRA4P59901 499 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 ERVK-21P61565 698 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 NOP14P78316 857 aaKnown RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 FANCCQ00597 558 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 PLCB2Q00722 1185 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 GCNT1Q02742 428 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 YWHAHQ04917 246 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-211ENST00000528787 WDR72Q3MJ13 1102 aa8.51□□□□□ -1.05
SSBP3-211ENST00000528787 ZNF280DQ6N043 979 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms