RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TUSC3Q13454 348 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 EPC2Q52LR7 807 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GTPBP10A4D1E9 387 aaKnown RBP13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 KRT19P08727 400 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MYL6P60660 151 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 NCOA4Q13772 614 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 COLGALT2Q8IYK4 626 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LRRC43Q8N309 656 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PI4K2AQ9BTU6 479 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PIRO00625 290 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ARHGEF15O94989 841 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SLC9A1P19634 815 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PIK3CAP42336 1068 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 KLK7P49862 253 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CLCNKBP51801 687 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ZNF75DP51815 510 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RBP5P82980 135 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 APBA1Q02410 837 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SYCP1Q15431 976 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CMTR2Q8IYT2 770 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RAD9AQ99638 391 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CWH43Q9H720 699 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.317e-11■■■■■ 260.8
TRAF3IP2-211ENST00000528599 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 F8W810 466 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PODXLO00592 558 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PON1P27169 355 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 RPL9P32969 192 aaKnown RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 PBX1P40424 430 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SMAD3P84022 425 aaKnown RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 CETN1Q12798 172 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 TRPC3Q13507 836 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 UPP1Q16831 310 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 SPRED2Q7Z698 418 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 C3orf58Q8NDZ4 430 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 INSL6Q9Y581 213 aa13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.31
TRAF3IP2-211ENST00000528599 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SPTLC1O15269 473 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TLL1O43897 1013 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ASS1P00966 412 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 DNAJB2P25686 324 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 PBX3P40426 434 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SLC11A1P49279 550 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 LRMPQ12912 555 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 CD300LGQ6UXG3 332 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 Q7L0L9 218 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 UROC1Q96N76 676 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 APOBEC3GQ9HC16 384 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 VCANP13611 3396 aa13.08□□□□□ -0.32
TRAF3IP2-211ENST00000528599 A0A1W2PQC6 194 aa13.07□□□□□ -0.32
TRAF3IP2-211ENST00000528599 NRP1O14786 923 aa13.07□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ADCY5O95622 1261 aa13.07□□□□□ -0.32
TRAF3IP2-211ENST00000528599 ITGB1P05556 798 aa13.07□□□□□ -0.32
TRAF3IP2-211ENST00000528599 TPM3P06753 285 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms