RNA–Protein interactions for RNA: ENST00000528380.1

KDM2A-209, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-209ENST00000528380 SMAD4Q13485 552 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 DSC3Q14574 896 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 BMS1Q14692 1282 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 TARBP2Q15633 366 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 LETM2Q2VYF4 491 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 PPP4R3AQ6IN85 833 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 TRMT1LQ7Z2T5 733 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 ADHFE1Q8IWW8 467 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 THNSL1Q8IYQ7 743 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 LRRC71Q8N4P6 559 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 EFHBQ8N7U6 833 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 ETNPPLQ8TBG4 499 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 SPPL3Q8TCT6 385 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 SNX29Q8TEQ0 813 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 POF1BQ8WVV4 589 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 PHF20Q9BVI0 1012 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 ADAMTS10Q9H324 1103 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 ALG13Q9NP73 1137 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 TLR9Q9NR96 1032 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 CCDC39Q9UFE4 941 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 PUF60Q9UHX1 559 aaKnown RBP7.5□□□□□ -1.21
KDM2A-209ENST00000528380 CD207Q9UJ71 328 aa7.5□□□□□ -1.21
KDM2A-209ENST00000528380 IGKV6-21A0A0C4DH24 114 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 A0A0U1RQF3 1178 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 PI4K2BG5E9Z4 385 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 MBTPS2O43462 519 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 MAFO75444 373 aaPredicted RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 FGF18O76093 207 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 RAB6AP20340 208 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 IBSPP21815 317 aaPredicted RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 KRT2P35908 639 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 QARSP47897 775 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 RAB27AP51159 221 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 KRT17Q04695 432 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 ZP2Q05996 745 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 PPP2R5CQ13362 524 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 ADAM15Q13444 863 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 TRIM29Q14134 588 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 NPY5RQ15761 445 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 SMAD2Q15796 467 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 UGCGQ16739 394 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 INF2Q27J81 1249 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 B3GNT9Q6UX72 402 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 OTUD6AQ7L8S5 288 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 ECHDC2Q86YB7 292 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 SLFN12Q8IYM2 578 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 COLGALT1Q8NBJ5 622 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 C2CD4AQ8NCU7 369 aaPredicted RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 MICAL1Q8TDZ2 1067 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 ZNF558Q96NG5 402 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 YIPF2Q9BWQ6 316 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 NGRNQ9NPE2 291 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 TYW1Q9NV66 732 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 STK39Q9UEW8 545 aa7.49□□□□□ -1.21
KDM2A-209ENST00000528380 TCF20Q9UGU0 1960 aaKnown RBP7.49□□□□□ -1.21
KDM2A-209ENST00000528380 KIAA1671Q9BY89 1806 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 FAM170BA6NMN3 283 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 DCXO43602 365 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 EDIL3O43854 480 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 CCNT1O60563 726 aaKnown RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 EYA4O95677 639 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 LTBRP36941 435 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 NRIP1P48552 1158 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 POLGP54098 1239 aaPredicted RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 AK2P54819 239 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 COASYQ13057 564 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 CAMK1Q14012 370 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 PCBP1Q15365 356 aaKnown RBP eCLIP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 EPHA7Q15375 998 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 MSMPQ1L6U9 139 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 FAM102BQ5T8I3 360 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 PIK3AP1Q6ZUJ8 805 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 TCP11Q8WWU5 503 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 PSPC1Q8WXF1 523 aaKnown RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 MRPS27Q92552 414 aaKnown RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 GTF3C6Q969F1 213 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 CEP170P1Q96L14 293 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 AIFM3Q96NN9 605 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 BHLHE41Q9C0J9 482 aaPredicted RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 EPHX3Q9H6B9 360 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 SOX17Q9H6I2 414 aaPredicted RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 CWH43Q9H720 699 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 TLE6Q9H808 572 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 KCNMB3Q9NPA1 279 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 CYP26B1Q9NR63 512 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 SUCLA2Q9P2R7 463 aaPredicted RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 ORC3Q9UBD5 711 aaPredicted RBP7.48□□□□□ -1.21
KDM2A-209ENST00000528380 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
KDM2A-209ENST00000528380 TPCN1Q9ULQ1 816 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms