RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 NEDD9Q14511 834 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 TMEM266Q2M3C6 531 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 FOXD4L6Q3SYB3 417 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 GNPTABQ3T906 1256 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 DNTTIP2Q5QJE6 756 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 PERM1Q5SV97 790 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 GIMAP6Q6P9H5 292 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 CASC1Q6TDU7 716 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 BTNL9Q6UXG8 535 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 FOXD4L3Q6VB84 417 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 RBM43Q6ZSC3 357 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 ZNF771Q7L3S4 317 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 ZNF438Q7Z4V0 828 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 LONP2Q86WA8 852 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 ERC1Q8IUD2 1116 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 OR13H1Q8NG92 308 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 SYTL5Q8TDW5 730 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 LOXL4Q96JB6 756 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 NSUN5Q96P11 429 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 LPIN3Q9BQK8 851 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 PHF20Q9BVI0 1012 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 MRPL9Q9BYD2 267 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 CELF4Q9BZC1 486 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 MAF1Q9H063 256 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 ZBP1Q9H171 429 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 CCDC86Q9H6F5 360 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 RGS18Q9NS28 235 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 TCP11L1Q9NUJ3 509 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 PAG1Q9NWQ8 432 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 ABI2Q9NYB9 513 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 FRRS1LQ9P0K9 344 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 KLK13Q9UKR3 277 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 POLIQ9UNA4 740 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 WASF3Q9UPY6 502 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 PAXBP1Q9Y5B6 917 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 ZFP37Q9Y6Q3 630 aaPredicted RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 IGF2RP11717 2491 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 THADAQ6YHU6 1953 aa4.56□□□□□ -1.68
CHD7-205ENST00000527825 TDRD15B5MCY1 1934 aaKnown RBP4.56□□□□□ -1.68
CHD7-205ENST00000527825 DSPP15924 2871 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 CEP295Q9C0D2 2601 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 ADAMTS9Q9P2N4 1935 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CAPN8A6NHC0 703 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 RRN3P2A6NIE6 340 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 C9IYK1 514 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 H0Y626 953 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CAPN9O14815 690 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 AP5Z1O43299 807 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 DHX16O60231 1041 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 FZD6O60353 706 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 MGEA5O60502 916 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 ZC3H11AO75152 810 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD7-205ENST00000527825 TRIM16O95361 564 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 SSBP05455 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD7-205ENST00000527825 IFIT2P09913 472 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 MYBP10242 640 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 H2AFXP16104 143 aaPredicted RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 GNAT2P19087 354 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 SDSP20132 328 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CSRP1P21291 193 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 MARK3P27448 753 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 MPLP40238 635 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CLCN4P51793 760 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 BCAR1P56945 870 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 SP2Q02086 613 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 UAP1L1Q3KQV9 507 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 PARM1Q6UWI2 310 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 SHISA2Q6UWI4 295 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 METTL7BQ6UX53 244 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 XKR5Q6UX68 686 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CYFIP1Q7L576 1253 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CACNA2D4Q7Z3S7 1137 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 DDX53Q86TM3 631 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 GLYCTKQ8IVS8 523 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 C17orf53Q8N3J3 647 aaPredicted RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 CMASQ8NFW8 434 aaPredicted RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 FEZF2Q8TBJ5 459 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 TBC1D5Q92609 795 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 FGF14Q92915 247 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CASD1Q96PB1 797 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 NACAP1Q9BZK3 213 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 CHRDQ9H2X0 955 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 TMX1Q9H3N1 280 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 SMOC1Q9H4F8 434 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 MRPL17Q9NRX2 175 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 ERAP1Q9NZ08 941 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 COL20A1Q9P218 1284 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 STK39Q9UEW8 545 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 MRPL11Q9Y3B7 192 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 PCDHGA5Q9Y5G8 931 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 PCDHA1Q9Y5I3 950 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 IRAK3Q9Y616 596 aa4.55□□□□□ -1.68
CHD7-205ENST00000527825 KIF26AQ9ULI4 1882 aaPredicted RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 HELZ2Q9BYK8 2649 aaKnown RBP4.55□□□□□ -1.68
CHD7-205ENST00000527825 A6NHS1 94 aa4.54□□□□□ -1.68
CHD7-205ENST00000527825 SHISA7A6NL88 538 aa4.54□□□□□ -1.68
CHD7-205ENST00000527825 GSG1L2A8MUP6 293 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms