RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 HS2ST1Q7LGA3 356 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 ELOA2Q8IYF1 753 aaPredicted RBP18.83■□□□□ 0.6
LTBP3-208ENST00000527339 GPD1LQ8N335 351 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 HASPINQ8TF76 798 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 AUTS2Q8WXX7 1259 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 ASIC4Q96FT7 647 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 PHF7Q9BWX1 381 aaPredicted RBP18.83■□□□□ 0.6
LTBP3-208ENST00000527339 PCIF1Q9H4Z3 704 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 MRPL17Q9NRX2 175 aaKnown RBP18.83■□□□□ 0.6
LTBP3-208ENST00000527339 AGPAT3Q9NRZ7 376 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 CHST7Q9NS84 486 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 CDH22Q9UJ99 828 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 WDR87Q6ZQQ6 2873 aa18.83■□□□□ 0.6
LTBP3-208ENST00000527339 EXTL3O43909 919 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 KINO60870 393 aaKnown RBP18.82■□□□□ 0.6
LTBP3-208ENST00000527339 KIF20AO95235 890 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 DSG1Q02413 1049 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 SPAG1Q07617 926 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 PNOCQ13519 176 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 USP41Q3LFD5 358 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 JADE1Q6IE81 842 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 KIAA1841Q6NSI8 718 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 CLEC17AQ6ZS10 378 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 TAS1R1Q7RTX1 841 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 BRSK2Q8IWQ3 736 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 GPR65Q8IYL9 337 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 S1PR5Q9H228 398 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 HSPBP1Q9NZL4 362 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 TUBGCP4Q9UGJ1 667 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 C2CD2Q9Y426 696 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 SPTBN4Q9H254 2564 aa18.82■□□□□ 0.6
LTBP3-208ENST00000527339 TRAPPC3O43617 180 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 LILRB3O75022 631 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 LRPAP1P30533 357 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 TMEM132DQ14C87 1099 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 KIAA0319Q5VV43 1072 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 SPATA1Q5VX52 437 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 NT5DC4Q86YG4 428 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 C12orf56Q8IXR9 622 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 C3orf58Q8NDZ4 430 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 ZSWIM2Q8NEG5 633 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 BEST2Q8NFU1 509 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 GOLGA5Q8TBA6 731 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 GSDMAQ96QA5 445 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 EMILIN2Q9BXX0 1053 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 KIAA1586Q9HCI6 787 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 RMND1Q9NWS8 449 aa18.81■□□□□ 0.6
LTBP3-208ENST00000527339 RBAKQ9NYW8 714 aaPredicted RBP18.81■□□□□ 0.6
LTBP3-208ENST00000527339 GOLGA8IPA6NC78 632 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 GOLGA8JA6NMD2 632 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 SMC2O95347 1197 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 PDGFBP01127 241 aaPredicted RBP18.8■□□□□ 0.6
LTBP3-208ENST00000527339 NFICP08651 508 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 SYCE2Q6PIF2 218 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 CD300LGQ6UXG3 332 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.8■□□□□ 0.6
LTBP3-208ENST00000527339 FBXL6Q8N531 539 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 NOC3LQ8WTT2 800 aaKnown RBP18.8■□□□□ 0.6
LTBP3-208ENST00000527339 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 APOL5Q9BWW9 433 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.8■□□□□ 0.6
LTBP3-208ENST00000527339 FAM86C1Q9NVL1 165 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 MYO10Q9HD67 2058 aa18.8■□□□□ 0.6
LTBP3-208ENST00000527339 PTPRZ1P23471 2315 aaPredicted RBP18.79■□□□□ 0.6
LTBP3-208ENST00000527339 MTCL1Q9Y4B5 1905 aaKnown RBP18.79■□□□□ 0.6
LTBP3-208ENST00000527339 ZNF233A6NK53 670 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 C2CD2LO14523 706 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 CLIC2O15247 247 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 CLASP2O75122 1294 aaKnown RBP18.79■□□□□ 0.6
LTBP3-208ENST00000527339 PRPF40AO75400 957 aaKnown RBP18.79■□□□□ 0.6
LTBP3-208ENST00000527339 SRGAP2BP0DMP2 458 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 CREMQ03060 361 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 FAM171A1Q5VUB5 890 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 TMEM184AQ6ZMB5 413 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 PPFIBP1Q86W92 1011 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 XXYLT1Q8NBI6 393 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 SPATA20Q8TB22 786 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 SMARCE1Q969G3 411 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 KCTD10Q9H3F6 313 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 RXFP1Q9HBX9 757 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 PLXNA3P51805 1871 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 SCN1AP35498 2009 aa18.79■□□□□ 0.6
LTBP3-208ENST00000527339 RIF1Q5UIP0 2472 aaKnown RBP18.79■□□□□ 0.6
LTBP3-208ENST00000527339 PDXKO00764 312 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 CNPP09543 421 aaKnown RBP18.78■□□□□ 0.6
LTBP3-208ENST00000527339 SP100P23497 879 aaPredicted RBP18.78■□□□□ 0.6
LTBP3-208ENST00000527339 IGFBP6P24592 240 aaPredicted RBP18.78■□□□□ 0.6
LTBP3-208ENST00000527339 SIGLEC14Q08ET2 396 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 SURF1Q15526 300 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 RTP2Q5QGT7 225 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
LTBP3-208ENST00000527339 TMEM174Q8WUU8 243 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 RIN2Q8WYP3 895 aaPredicted RBP18.78■□□□□ 0.6
LTBP3-208ENST00000527339 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 B3GALT6Q96L58 329 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
LTBP3-208ENST00000527339 GTPBP4Q9BZE4 634 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms