RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 USP41Q3LFD5 358 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 DPCR1Q3MIW9 517 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 TIGD5Q53EQ6 642 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 LMBRD2Q68DH5 695 aaPredicted RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 CAVIN1Q6NZI2 390 aaKnown RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 INTS8Q75QN2 995 aaKnown RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 ZNF516Q92618 1163 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 BORCS6Q96GS4 357 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 ANKRD36BP1Q96IX9 119 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 MED15Q96RN5 788 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 HERC2P3Q9BVR0 1158 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 MTMR12Q9C0I1 747 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
SMPD1-202ENST00000526280 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 NUB1Q9Y5A7 615 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 PCDHGC5Q9Y5F6 944 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 IRAK3Q9Y616 596 aa13.97□□□□□ -0.17
SMPD1-202ENST00000526280 ATG2AQ2TAZ0 1938 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 C2orf71A6NGG8 1288 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 LRRIQ3A6PVS8 624 aaPredicted RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SLC16A3O15427 465 aaKnown RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 LILRB3O75022 631 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 PAX3P23760 479 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 BRCC3P46736 316 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 AARSP49588 968 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 VAMP7P51809 220 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 AP3M2P53677 418 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 LILRA4P59901 499 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 DLG4P78352 724 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SMC1AQ14683 1233 aaKnown RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SKOR2Q2VWA4 1001 aaPredicted RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 CT47A1Q5JQC4 288 aaPredicted RBP13.96□□□□□ -0.17
SMPD1-202ENST00000526280 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 KIAA0319Q5VV43 1072 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 PLPP4Q5VZY2 271 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 GPR65Q8IYL9 337 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 CSGALNACT2Q8N6G5 542 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 CEP63Q96MT8 703 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SIX4Q9UIU6 781 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 SCN1AP35498 2009 aa13.96□□□□□ -0.17
SMPD1-202ENST00000526280 COL6A3P12111 3177 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 HIDE1A8MVS5 230 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 I3L4J1 428 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 IKBKBO14920 756 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 ITGB3P05106 788 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 KRT13P13646 458 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 FGFR3P22607 806 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
SMPD1-202ENST00000526280 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
SMPD1-202ENST00000526280 GLUD2P49448 558 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 RBP5P82980 135 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 BFSP1Q12934 665 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 PTPN14Q15678 1187 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 C1orf220Q5T0J3 134 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 KIAA1841Q6NSI8 718 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 SASS6Q6UVJ0 657 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
SMPD1-202ENST00000526280 USP37Q86T82 979 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 AUTS2Q8WXX7 1259 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 TTPALQ9BTX7 342 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 MRPL17Q9NRX2 175 aaKnown RBP13.95□□□□□ -0.18
SMPD1-202ENST00000526280 AGAP1Q9UPQ3 857 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 SSX2IPQ9Y2D8 614 aa13.95□□□□□ -0.18
SMPD1-202ENST00000526280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.94□□□□□ -0.18
SMPD1-202ENST00000526280 M0QZQ0 153 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 C2CD2LO14523 706 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 SPTLC1O15269 473 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 C4BPAP04003 597 aaKnown RBP13.94□□□□□ -0.18
SMPD1-202ENST00000526280 URODP06132 367 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 PNPLA4P41247 253 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 TAF6P49848 677 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 RTP2Q5QGT7 225 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 ADGRD2Q7Z7M1 963 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 CEP57Q86XR8 500 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 MICALL1Q8N3F8 863 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
SMPD1-202ENST00000526280 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
SMPD1-202ENST00000526280 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 SRRTQ9BXP5 876 aaKnown RBP13.94□□□□□ -0.18
SMPD1-202ENST00000526280 REV3LO60673 3130 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
SMPD1-202ENST00000526280 EYSQ5T1H1 3165 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 SYN3O14994 580 aa13.93□□□□□ -0.18
SMPD1-202ENST00000526280 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 CST3P01034 146 aaPredicted RBP13.93□□□□□ -0.18
SMPD1-202ENST00000526280 KRT19P08727 400 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms