RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 MANSC1Q9H8J5 431 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 RUVBL1Q9Y265 456 aaKnown RBP5.68□□□□□ -1.5
CSDE1-210ENST00000525878 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 K7ESF4 209 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 MPPED1O15442 326 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 OSMP13725 252 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 WASP42768 502 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 ERVK-21P61565 698 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 LHFPL2Q6ZUX7 228 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 DCBLD1Q8N8Z6 715 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 NLGN4YQ8NFZ3 816 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-210ENST00000525878 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 CHAC2Q8WUX2 184 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 C1QTNF7Q9BXJ2 289 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
CSDE1-210ENST00000525878 VSX1Q9NZR4 365 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-210ENST00000525878 MYBBP1AQ9BQG0 1328 aaKnown RBP5.67□□□□□ -1.5
CSDE1-210ENST00000525878 CCDC151A5D8V7 595 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 YY2O15391 372 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 MASP1P48740 699 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 CTXN1P60606 82 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 TMPRSS15P98073 1019 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 SARAFQ96BY9 339 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 GPR45Q9Y5Y3 372 aa5.66□□□□□ -1.5
CSDE1-210ENST00000525878 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-210ENST00000525878 GPR39O43194 453 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 PRAMEF10O60809 474 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 HAUS5O94927 633 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 ERBB2P04626 1255 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 ELFN1P0C7U0 828 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 AGXTP21549 392 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 MAPK10P53779 464 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-210ENST00000525878 GRASPQ7Z6J2 395 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-210ENST00000525878 TLR10Q9BXR5 811 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 C11orf54Q9H0W9 315 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-210ENST00000525878 INTS13Q9NVM9 706 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 CTTNBP2NLQ9P2B4 639 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 DNM3Q9UQ16 869 aa5.65□□□□□ -1.5
CSDE1-210ENST00000525878 KIAA0391O15091 583 aaKnown RBP5.64□□□□□ -1.51
CSDE1-210ENST00000525878 KCNA2P16389 499 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 GATA3P23771 443 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 NBPF8Q3BBV2 869 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 MICALCLQ6ZW33 695 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 PEG10Q86TG7 708 aaKnown RBP5.64□□□□□ -1.51
CSDE1-210ENST00000525878 SCARB1Q8WTV0 552 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 C7orf25Q9BPX7 421 aa5.64□□□□□ -1.51
CSDE1-210ENST00000525878 ITGB6P18564 788 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 ITPKBP27987 946 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 GRIA3P42263 894 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 ABCG1P45844 678 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 RPS7P62081 194 aaKnown RBP5.63□□□□□ -1.51
CSDE1-210ENST00000525878 CREMQ03060 361 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 PTPRRQ15256 657 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 AKNAD1Q5T1N1 836 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 KAZNQ674X7 775 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 PTF1AQ7RTS3 328 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 TMPRSS9Q7Z410 1059 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 CLNKQ7Z7G1 428 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 LPIN2Q92539 896 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 DPF2Q92785 391 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 RNF7Q9UBF6 113 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 NEU2Q9Y3R4 380 aa5.63□□□□□ -1.51
CSDE1-210ENST00000525878 TLDC2A0PJX2 215 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 TRIM75PA6NK02 468 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
CSDE1-210ENST00000525878 SBK3P0C264 359 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 HSD3B2P26439 372 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 SOX10P56693 466 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 SRSF4Q08170 494 aaKnown RBP5.62□□□□□ -1.51
CSDE1-210ENST00000525878 TARDBPQ13148 414 aaKnown RBP eCLIP5.62□□□□□ -1.51
CSDE1-210ENST00000525878 ATP2B3Q16720 1220 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 EPHA10Q5JZY3 1008 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 SPATS2Q86XZ4 545 aaKnown RBP5.62□□□□□ -1.51
CSDE1-210ENST00000525878 IL17RDQ8NFM7 739 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 NRG4Q8WWG1 115 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 SMG7Q92540 1137 aaKnown RBP5.62□□□□□ -1.51
CSDE1-210ENST00000525878 DPF1Q92782 380 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 TMEM125Q96AQ2 219 aa5.62□□□□□ -1.51
CSDE1-210ENST00000525878 WDR27A2RRH5 827 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 ADM5C9JUS6 153 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 AGFG2O95081 481 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 CPEP16870 476 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 PABPC1LQ4VXU2 614 aaKnown RBP5.61□□□□□ -1.51
CSDE1-210ENST00000525878 UTP14CQ5TAP6 766 aaKnown RBP5.61□□□□□ -1.51
CSDE1-210ENST00000525878 KRT26Q7Z3Y9 468 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 RHOT1Q8IXI2 618 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 SLC30A5Q8TAD4 765 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 WDR66Q8TBY9 1149 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 IFI44Q8TCB0 444 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 SSH1Q8WYL5 1049 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 TFAP2BQ92481 460 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 PGBD1Q96JS3 809 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 SLKQ9H2G2 1235 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-210ENST00000525878 CPNE5Q9HCH3 593 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms