RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 NCOR2Q9Y618 2525 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CCDC69A6NI79 296 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 GOLGA8KD6RF30 607 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 ARHGAP6O43182 974 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 STX6O43752 255 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 RNGTTO60942 597 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 HMMRO75330 724 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 TBX10O75333 385 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 IDH1O75874 414 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 CSPG5O95196 566 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 EYA4O95677 639 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 F13A1P00488 732 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 PDGFBP01127 241 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 RB1P06400 928 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 P4HBP07237 508 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 EIF4BP23588 611 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 GNA15P30679 374 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CTNNB1P35222 781 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 ROR2Q01974 943 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 CNTN2Q02246 1040 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 DMWDQ09019 674 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 PPFIA1Q13136 1202 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 ADAM15Q13444 863 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 GNL2Q13823 731 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 IQCB1Q15051 598 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 LRRC23Q53EV4 343 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 NAIF1Q69YI7 327 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 ISM2Q6H9L7 571 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 LLGL2Q6P1M3 1020 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 SLC30A9Q6PML9 568 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 DPH6Q7L8W6 267 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 TRIM74Q86UV6 250 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 TRIM73Q86UV7 250 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 FBXO16Q8IX29 292 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 RNF168Q8IYW5 571 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 CEP57L1Q8IYX8 460 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 C17orf53Q8N3J3 647 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 FIBCD1Q8N539 461 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 TMEM105Q8N8V8 129 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 MSANTD4Q8NCY6 345 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CNNM3Q8NE01 707 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 REPS2Q8NFH8 660 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 OR6J1Q8NGC5 347 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 FAM76AQ8TAV0 307 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CACTINQ8WUQ7 758 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 C17orf50Q8WW18 174 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 JAKMIP2Q96AA8 810 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 BICD1Q96G01 975 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CCDC17Q96LX7 622 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 ALS2CR12Q96Q35 445 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 NAP1L3Q99457 506 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 C11orf84Q9BUA3 381 aaPredicted RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 TRIM7Q9C029 511 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 KATNBL1Q9H079 304 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 RANBP17Q9H2T7 1088 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 RAVER2Q9HCJ3 691 aaKnown RBP5.48□□□□□ -1.53
CD44-218ENST00000525469 HOMER2Q9NSB8 354 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 MYO1AQ9UBC5 1043 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 PCOLCE2Q9UKZ9 415 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 CYP8B1Q9UNU6 501 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 RIPK3Q9Y572 518 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 FAM169AQ9Y6X4 670 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 FAM208BQ5VWN6 2430 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
CD44-218ENST00000525469 DMXL1Q9Y485 3027 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 ATP2A1O14983 1001 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 MEFVO15553 781 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 ZNF862O60290 1169 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CEP104O60308 925 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CAND2O75155 1236 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 RTN2O75298 545 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CXCL10P02778 98 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 USP17L7P0C7H9 530 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 CHMLP26374 656 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 ERCC5P28715 1186 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 NEK4P51957 841 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 SESN3P58005 492 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 HTRA4P83105 476 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 DEUP1Q05D60 604 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 COASYQ13057 564 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 DUSP28Q4G0W2 176 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CCDC181Q5TID7 509 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 NUGGCQ68CJ6 796 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 WDR93Q6P2C0 686 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 OGFOD3Q6PK18 319 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 LRRC31Q6UY01 552 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 SEPT14Q6ZU15 432 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 RSRC2Q7L4I2 434 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 SRGAP1Q7Z6B7 1085 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 NOP9Q86U38 636 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 SESTD1Q86VW0 696 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CCDC83Q8IWF9 413 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 RPAP2Q8IXW5 612 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 UBALD2Q8IYN6 164 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 STK11IPQ8N1F8 1099 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms