RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MTMR12Q9C0I1 747 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 TMEM117Q9H0C3 514 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 APOBEC3GQ9HC16 384 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 INTS13Q9NVM9 706 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 TAB2Q9NYJ8 693 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 KCNG1Q9UIX4 513 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 AJAP1Q9UKB5 411 aaPredicted RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 NME7Q9Y5B8 376 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 KIAA1671Q9BY89 1806 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 MYO7AQ13402 2215 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 PDCD11Q14690 1871 aaKnown RBP7.02□□□□□ -1.28
CD44-214ENST00000525211 SZT2Q5T011 3432 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CITO14578 2027 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SCN1AP35498 2009 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 ANO9A1A5B4 782 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 NRP1O14786 923 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CETN3O15182 167 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 TEX33O43247 280 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 TLL1O43897 1013 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CSPG5O95196 566 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 KIF4AO95239 1232 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 EFEMP2O95967 443 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CFHP08603 1231 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SCP2P22307 547 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PSMC2P35998 433 aaKnown RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 CLCNKBP51801 687 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 VAMP7P51809 220 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SNRPFP62306 86 aaKnown RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 CLDN10P78369 228 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 TFAMQ00059 246 aaKnown RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 BFSP1Q12934 665 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 STIM1Q13586 685 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 MYBPC2Q14324 1141 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 KRT31Q15323 416 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CCDC142Q17RM4 750 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 GJB7Q6PEY0 223 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 GLB1LQ6UWU2 654 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 C15orf39Q6ZRI6 1047 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SV2AQ7L0J3 742 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 COLGALT1Q8NBJ5 622 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 LMO3Q8TAP4 145 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 FEZF2Q8TBJ5 459 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PHOSPHO2Q8TCD6 241 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SLC35C1Q96A29 364 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PGBD4Q96DM1 585 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 NAP1L5Q96NT1 182 aaPredicted RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 RAD9AQ99638 391 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 CGRRF1Q99675 332 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 TSG101Q99816 390 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 GPR62Q9BZJ7 368 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 SDCBP2Q9H190 292 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 TTYH1Q9H313 450 aaPredicted RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 TSPY26PQ9H489 355 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 MTUS1Q9ULD2 1270 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PCDHGC3Q9UN70 934 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 POLIQ9UNA4 740 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 PRG3Q9Y2Y8 225 aaPredicted RBP7.02□□□□□ -1.29
CD44-214ENST00000525211 RALGAPA2Q2PPJ7 1873 aa7.02□□□□□ -1.29
CD44-214ENST00000525211 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 BICDL2A1A5D9 508 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 KCNJ18B7U540 433 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 PIRO00625 290 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 EPHB6O15197 1021 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 GRM6O15303 877 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 SLC16A3O15427 465 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 EFCAB14O75071 495 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 ZC3H11AO75152 810 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD44-214ENST00000525211 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 LDHAP00338 332 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 CALCAP01258 141 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 HLA-DRAP01903 254 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 ITGB3P05106 788 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 THP07101 528 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 SKIP12755 728 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 ABCD1P33897 745 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 OR1G1P47890 313 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 MYL6P60660 151 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 MYL5Q02045 173 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 PPP2R3AQ06190 1150 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 KCNMA1Q12791 1236 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 GRIK3Q13003 919 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CAMK1Q14012 370 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 BTG3Q14201 252 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 KCNJ12Q14500 433 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TMEM132DQ14C87 1099 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 UPP1Q16831 310 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TMEM259Q4ZIN3 620 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TIGD5Q53EQ6 642 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TCP11X2Q5H9J9 407 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 DCAF17Q5H9S7 520 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 C9orf57Q5W0N0 161 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 FOXR2Q6PJQ5 311 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms