RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SEC24AO95486 1093 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 C8AP07357 584 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 CLTAP09496 248 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 STAT6P42226 847 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 GUCY2FP51841 1108 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
SMCO4-202ENST00000525141 E2F4Q16254 413 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PDILTQ8N807 584 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 IQUBQ8NA54 791 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 ST6GALNAC4Q9H4F1 302 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PLEKHA5Q9HAU0 1116 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 HCFC1R1Q9NWW0 138 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 DNMT3BQ9UBC3 853 aaKnown RBP13.66□□□□□ -0.22
SMCO4-202ENST00000525141 KMT2EQ8IZD2 1858 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
SMCO4-202ENST00000525141 CCL16O15467 120 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 TRAPPC3O43617 180 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 PI15O43692 258 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 FAM13AO94988 1023 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 HNRNPA1P09651 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMCO4-202ENST00000525141 LRPAP1P30533 357 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
SMCO4-202ENST00000525141 KCNA1Q09470 495 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 PPM1LQ5SGD2 360 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 SLC8B1Q6J4K2 584 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 ANKS3Q6ZW76 656 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 DYMQ7RTS9 669 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 TMEM105Q8N8V8 129 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
SMCO4-202ENST00000525141 LRRC27Q9C0I9 530 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 ZHX3Q9H4I2 956 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 IGSF9Q9P2J2 1179 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 FBXL5Q9UKA1 691 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 CPSF3Q9UKF6 684 aaKnown RBP13.65□□□□□ -0.22
SMCO4-202ENST00000525141 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 STYXL1Q9Y6J8 313 aa13.65□□□□□ -0.22
SMCO4-202ENST00000525141 FAM237AA0A1B0GTK4 181 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 A0A1W2PQ27 194 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 A0A1W2PQ64 194 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 WDR27A2RRH5 827 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 H0YCG3 227 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 PPEF2O14830 753 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 SYN3O14994 580 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 OGTO15294 1046 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
SMCO4-202ENST00000525141 PPP1R37O75864 691 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
SMCO4-202ENST00000525141 SCP2P22307 547 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 FSHRP23945 695 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 ADSSP30520 456 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 HOXA9P31269 272 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 LIG4P49917 911 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 AMPD3Q01432 767 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 ROR1Q01973 937 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 SCARA3Q6AZY7 606 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 ELMSAN1Q6PJG2 1045 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 CRELD2Q6UXH1 353 aaPredicted RBP13.64□□□□□ -0.23
SMCO4-202ENST00000525141 ALYREFQ86V81 257 aaKnown RBP13.64□□□□□ -0.23
SMCO4-202ENST00000525141 SLC7A14Q8TBB6 771 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 DDX12PQ92771 950 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 MAGEF1Q9HAY2 307 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 KBTBD4Q9NVX7 518 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMCO4-202ENST00000525141 DUSP12Q9UNI6 340 aa13.64□□□□□ -0.23
SMCO4-202ENST00000525141 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 CACNA1HO95180 2353 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 KRBA1A5PL33 1030 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 K7ENM7 598 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 M0QZQ0 153 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 VNN2O95498 520 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 POU2F2P09086 479 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 CYP3A5P20815 502 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMCO4-202ENST00000525141 AARSP49588 968 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMCO4-202ENST00000525141 ACOT2P49753 483 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 HTR4Q13639 388 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 PARM1Q6UWI2 310 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 SFR1Q86XK3 245 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
SMCO4-202ENST00000525141 ZSWIM2Q8NEG5 633 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 STAMQ92783 540 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 BICD1Q96G01 975 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 FGFBP2Q9BYJ0 223 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms