RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PARD3BQ8TEW8 1205 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RSPH1Q8WYR4 309 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SEMA4DQ92854 862 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 MRPL38Q96DV4 380 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 DHTKD1Q96HY7 919 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ANKRD36BP1Q96IX9 119 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 MFSD14AQ96MC6 490 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 FBXL18Q96ME1 805 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SAMD11Q96NU1 681 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM209Q96SK2 561 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CGRRF1Q99675 332 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM175Q9BSA9 504 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ZBP1Q9H171 429 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ASB7Q9H672 318 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 KIAA1586Q9HCI6 787 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TLR9Q9NR96 1032 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SAMSN1Q9NSI8 373 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SLC38A7Q9NVC3 462 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 NXF1Q9UBU9 619 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PUF60Q9UHX1 559 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RWDD2AQ9UIY3 292 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CDH22Q9UJ99 828 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CHD9Q3L8U1 2897 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 FAM170AA1A519 330 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 ANO9A1A5B4 782 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 BICDL2A1A5D9 508 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 C2orf71A6NGG8 1288 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 H3BQ06 376 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PES1O00541 588 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PIRO00625 290 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CYB561D2O14569 222 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 FSCN2O14926 492 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 KIAA0391O15091 583 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TEX28O15482 410 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CALCAP01258 141 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 HLA-DRAP01903 254 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 C4BPAP04003 597 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SOD2P04179 222 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 URODP06132 367 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CNPP09543 421 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PDGFRBP09619 1106 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 EPB41P11171 864 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 EPCAMP16422 314 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 ACAT1P24752 427 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 RPL13P26373 211 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 KLRC2P26717 231 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PPM1AP35813 382 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PIK3CAP42336 1068 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 GLUD2P49448 558 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CDH8P55286 799 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 LILRA4P59901 499 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SNRPFP62306 86 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 RBP5P82980 135 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 FKBP3Q00688 224 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TFF2Q03403 129 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 LRRC63Q05C16 580 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 DLX2Q07687 328 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 HYAL1Q12794 435 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PTPN14Q15678 1187 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 STX1AQ16623 288 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 KYAT1Q16773 422 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 DUOXA2Q1HG44 320 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 EDRF1Q3B7T1 1238 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 COBLL1Q53SF7 1204 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CBWD5Q5RIA9 395 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 WSCD1Q658N2 575 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SV2AQ7L0J3 742 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 FILIP1Q7Z7B0 1213 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 OSTM1Q86WC4 334 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 IRF2BP1Q8IU81 584 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 WDR49Q8IV35 697 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC9A9Q8IVB4 645 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CD302Q8IX05 232 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 ZC3H3Q8IXZ2 948 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 C12orf76Q8N812 135 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 STKLD1Q8NE28 680 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 MAFAQ8NHW3 353 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 LNX1Q8TBB1 728 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TMC2Q8TDI7 906 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TAS1R2Q8TE23 839 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CACTINQ8WUQ7 758 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TATDN2Q93075 761 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 DDX27Q96GQ7 796 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 BORCS6Q96GS4 357 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 HPDLQ96IR7 371 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SENP8Q96LD8 212 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 CNOT6LQ96LI5 555 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 UROC1Q96N76 676 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PGLYRP2Q96PD5 576 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 KLHL5Q96PQ7 755 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 MMS19Q96T76 1030 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 MRPL45Q9BRJ2 306 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TTPALQ9BTX7 342 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 HERC2P3Q9BVR0 1158 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 PLVAPQ9BX97 442 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 SDCBP2Q9H190 292 aa4.96□□□□□ -1.62
CHMP4A-202ENST00000524955 TLE6Q9H808 572 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms