RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 NSD3Q9BZ95 1437 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 LEFTY2O00292 366 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 ITGA10O75578 1167 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 NCR1O76036 304 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 ZSCAN20P17040 1043 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-208ENST00000524652 BMPR1AP36894 532 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 FAM189BP81408 668 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 KRTAP1-1Q07627 177 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 BEAN1Q3B7T3 259 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 PITRM1Q5JRX3 1037 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 CCDC62Q6P9F0 684 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 Q6YL49 198 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 PDZD4Q76G19 769 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-208ENST00000524652 KRT28Q7Z3Y7 464 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 RASSF3Q86WH2 238 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 BEND2Q8NDZ0 799 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 GPR150Q8NGU9 434 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 PUS7Q96PZ0 661 aaKnown RBP3.97□□□□□ -1.77
CSDE1-208ENST00000524652 POLR3GLQ9BT43 218 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 ANO3Q9BYT9 981 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 SERHL2Q9H4I8 314 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 SPON1Q9HCB6 807 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 AKIP1Q9NQ31 210 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 DKK2Q9UBU2 259 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.97□□□□□ -1.77
CSDE1-208ENST00000524652 KTN1Q86UP2 1357 aaKnown RBP3.97□□□□□ -1.77
CSDE1-208ENST00000524652 PNPLA6Q8IY17 1366 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 SPATA31A3Q5VYP0 1347 aa3.96□□□□□ -1.77
CSDE1-208ENST00000524652 TTC21BQ7Z4L5 1316 aa3.96□□□□□ -1.77
CSDE1-208ENST00000524652 EDC4Q6P2E9 1401 aaKnown RBP3.96□□□□□ -1.77
CSDE1-208ENST00000524652 NWD2Q9ULI1 1742 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 ZAR1LA6NP61 321 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 TBKBP1A7MCY6 615 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 GSG1L2A8MUP6 293 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 LPXNO60711 386 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NUDT3O95989 172 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 CLEC2LP0C7M8 214 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 SPATA31D3P0C874 917 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 RBP3P10745 1247 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 CTSSP25774 331 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 CRHR1P34998 444 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 AVPR1BP47901 424 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 PTTG1IPP53801 180 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 USP14P54578 494 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NHLH2Q02577 135 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 GJC2Q5T442 439 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-208ENST00000524652 BTNL9Q6UXG8 535 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 ABHD15Q6UXT9 468 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 SPATA31D4Q6ZUB0 917 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NPM2Q86SE8 214 aaKnown RBP3.96□□□□□ -1.78
CSDE1-208ENST00000524652 SYT12Q8IV01 421 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 OR10H5Q8NGA6 315 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 ZNF480Q8WV37 535 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 VOPP1Q96AW1 172 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 COQ10AQ96MF6 247 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 KCTD10Q9H3F6 313 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 RIOX1Q9H6W3 641 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 PANK3Q9H999 370 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 GPRC5DQ9NZD1 345 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 MAPRE3Q9UPY8 281 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NOC2LQ9Y3T9 749 aaKnown RBP3.96□□□□□ -1.78
CSDE1-208ENST00000524652 MRPL42Q9Y6G3 142 aaKnown RBP3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NINLQ9Y2I6 1382 aa3.96□□□□□ -1.78
CSDE1-208ENST00000524652 COL14A1Q05707 1796 aaKnown RBP3.96□□□□□ -1.78
CSDE1-208ENST00000524652 NPHP3Q7Z494 1330 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 RGPD1P0DJD0 1748 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 SHANK3Q9BYB0 1731 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 BRWD3Q6RI45 1802 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 FAM208AQ9UK61 1670 aaKnown RBP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 CAMTA1Q9Y6Y1 1673 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 SBNO1A3KN83 1393 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 A0A087X0B3 334 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 PJA2O43164 708 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 PDE8AO60658 829 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 PHF2O75151 1096 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 HLA-DOAP06340 250 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 BPIP17213 487 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 FLT3LGP49771 235 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 LGALS4P56470 323 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 RNASE9P60153 205 aaKnown RBP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 BLOC1S1P78537 153 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 DHCR24Q15392 516 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 CSRP2Q16527 193 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 FSCN1Q16658 493 aaKnown RBP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 BMT2Q1RMZ1 405 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 ATP13A4Q4VNC1 1196 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 EFCAB12Q6NXP0 572 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 NGDNQ8NEJ9 315 aaKnown RBP3.95□□□□□ -1.78
CSDE1-208ENST00000524652 SUPT20HQ8NEM7 779 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 ZFP28Q8NHY6 868 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 TFAP2CQ92754 450 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 ACAP3Q96P50 834 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 PRDM12Q9H4Q4 367 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 SYBUQ9NX95 663 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 ZNHIT2Q9UHR6 403 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 DLG5Q8TDM6 1919 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 USP19O94966 1318 aa3.95□□□□□ -1.78
CSDE1-208ENST00000524652 MARCH11A6NNE9 402 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms