RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NFKBIZQ9BYH8 718 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 ERVK-5Q9HDB9 667 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 KMT5AQ9NQR1 393 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 FAM207AQ9NSI2 230 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 AGPAT5Q9NUQ2 364 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 TRMT1Q9NXH9 659 aaKnown RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 INTUQ9ULD6 942 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 PCDHB3Q9Y5E6 796 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 CHD9Q3L8U1 2897 aa7.65□□□□□ -1.19
VPS11-201ENST00000524454 UQCRHLA0A096LP55 91 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 IGKV6-21A0A0C4DH24 114 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 LRRC53A6NM62 1247 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ASAP2O43150 1006 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 EXOC3O60645 756 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 EFCAB14O75071 495 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 SLU7O95391 586 aaKnown RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 LDHAP00338 332 aaKnown RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 TUBBP07437 444 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 UQCRHP07919 91 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 FERP16591 822 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 PON1P27169 355 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 CASQ1P31415 396 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ARL2P36404 184 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 GPC3P51654 580 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 CRYBB1P53674 252 aaPredicted RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 POLGP54098 1239 aaPredicted RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 PEX3P56589 373 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 JAM2P57087 298 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 GNG11P61952 73 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 CLDN10P78369 228 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 KIF5AQ12840 1032 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 SLC18A3Q16572 532 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 PAN2Q504Q3 1202 aaKnown RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 ZC2HC1CQ53FD0 456 aaPredicted RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 FAM102BQ5T8I3 360 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 HGSNATQ68CP4 663 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 CDCA2Q69YH5 1023 aaPredicted RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 DPY19L2P1Q6NXN4 242 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ZPBP2Q6X784 338 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 SYT10Q6XYQ8 523 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ENOSF1Q7L5Y1 443 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 RHPN2Q8IUC4 686 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 NME8Q8N427 588 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 TRIM58Q8NG06 486 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 TOP1MTQ969P6 601 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 JAKMIP2Q96AA8 810 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 TMEM143Q96AN5 459 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 RPGRIP1Q96KN7 1286 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 MFSD14AQ96MC6 490 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 NLRP4Q96MN2 994 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 MAP7D2Q96T17 732 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 GAS2L1Q99501 681 aaPredicted RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 RAD9AQ99638 391 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 LSM14BQ9BX40 385 aaKnown RBP7.64□□□□□ -1.19
VPS11-201ENST00000524454 STK33Q9BYT3 514 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 C2orf40Q9H1Z8 148 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ADAMTS10Q9H324 1103 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 XPNPEP1Q9NQW7 623 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 HSPBP1Q9NZL4 362 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 GCNT4Q9P109 453 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ARHGAP20Q9P2F6 1191 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 APEX2Q9UBZ4 518 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 ST3GAL5Q9UNP4 418 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 COQ4Q9Y3A0 265 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 EYSQ5T1H1 3165 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 TTC3P53804 2025 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 PLXNA4Q9HCM2 1894 aa7.64□□□□□ -1.19
VPS11-201ENST00000524454 COL6A3P12111 3177 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 A0A087WZ62 844 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 DENND3A2RUS2 1198 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 CTAGE9A4FU28 777 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 MAGEB2O15479 319 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 PRLRP16471 622 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 ARHGAP25P42331 645 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 VAMP7P51809 220 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 KIF11P52732 1056 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 AP3M2P53677 418 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 HTRA4P83105 476 aaPredicted RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 MYL7Q01449 175 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 GOLGA8FQ08AF8 430 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 KCNA1Q09470 495 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 GOLGA8DPQ0D2H9 430 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 STRN3Q13033 797 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 BMS1Q14692 1282 aaKnown RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 MTF1Q14872 753 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 PCBP1Q15365 356 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS11-201ENST00000524454 SNRNP35Q16560 246 aaKnown RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 DCAF17Q5H9S7 520 aaPredicted RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 MAEAQ7L5Y9 396 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 EEF2KMTQ96G04 330 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 SPAG5Q96R06 1193 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 CHP1Q99653 195 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 ADAM2Q99965 735 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 FDXACB1Q9BRP7 624 aaPredicted RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 POLR3FQ9H1D9 316 aaPredicted RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 DEF6Q9H4E7 631 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms